Bartonella quintana Toulouse: BQ07120
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Entry
BQ07120 CDS
T00181
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase beta prime chain
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bqu
Bartonella quintana Toulouse
Pathway
bqu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bqu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BQ07120 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bqu03021
]
BQ07120 (rpoC)
03400 DNA repair and recombination proteins [BR:
bqu03400
]
BQ07120 (rpoC)
Enzymes [BR:
bqu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BQ07120 (rpoC)
Transcription machinery [BR:
bqu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BQ07120 (rpoC)
DNA repair and recombination proteins [BR:
bqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BQ07120 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
CAF26201
UniProt:
Q6FZM0
LinkDB
All DBs
Position
complement(841781..845989)
Genome browser
AA seq
1402 aa
AA seq
DB search
MNHEVMNLFNPQAPAQTFDSIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPGRISTLLDLTLKDIERVLYFENYIVTESGLTSLKLHQLLSEEEYMLAIDEFGEDQFTA
MIGAEAIYELLAGMELEKIANDLRVELSETTSELKQKKLIKRLKIVENFLESGNRPEWMI
MKTIPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIVRNEKRM
VQEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAKKLVEKEHPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGAPIIVPSQDMVLGLYYLSIVSEKEPGEGMAFSDMGELHHALE
NKVVTLHTKIKGRVKNIDKDGKEVAKLYDTTPGRLIIGELLPKNPNISFDIVNQEMTKKN
ISKMIDQVYRHCGQKETVIFCDRIMQLGFSHACRAGISFGKDDMVIPDSKLRLVAETEAL
AKEYEQQYNDGLITQGEKYNKVVDAWGKCTDRVADEMMKRIQAVEFDPKTGRQRPMNSIY
MMSHSGARGSANQMKQLAGMRGLMAKPSGEIIETPIISNFKEGLTVNEYFNSTHGARKGL
ADTALKTANSGYLTRRLVDVAQDAIISAVDCGTAKGLTMQPIVDAGQIVASLGQRILGRT
ALVDILHPVSGEVIVEGGVMIEETDVAKIEEAGIQSVQIRSALTCETRLGVCAKCYGRDL
ARGTPVNQGEAVGVIAAQSIGEPGTQLTMRTFHLGGTAQVVDSSHLEASYEGTVEIRNRN
VVHNSEGHLVVMGRNMVILIKDGSGKERVVHRISYGAHIFVDDGDVVKCGQRIAEWDPYT
RPILTEVEGYVGFEDMIDGLSVTETADESTGITKRLVIDWRANPRGADLKPAIIIHADKK
GEDIAKYKGGEARYMMSVDTILSVEPGAHVKAGDVIARLPMESAKTKDITGGLPRVAELF
EARRPKDHAIIAEVSGTIQFGRGYKNKRRIIIEPNDETLEPVEYLIPKGKLFHFQEGDQI
EKGDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKV
EITESGDSGYIPGDHVDRIELDEINDNLIAEGKRPASGNPILLGITKASLQTPSFISAAS
FQETTRVLTEAAVSGKIDTLQGLKENVIVGRLIPAGTGGTIAQIRRIAAVRDNLIVDERR
KSSDSQVAKIMLTNMTTGATAE
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacgaggtcatgaatcttttcaatcctcaggcgccagcgcagacatttgactct
attcgtatttcaattgcgagccctgagaagattttgtcttggtcgtatggtgagatcaag
aagcctgagactattaattataggacttttaagccagagcgtgatggtcttttctgtgca
cgtatatttggcccgattaaagactacgaatgtctatgcggtaaatataaacgcatgaaa
tataagggcattatctgtgaaaaatgtggtgtagaggttactctttcgcgtgtacgtcgt
gagcgtatgggacacattgaacttgcagcacctgtcgctcatatttggttccttaaatca
ttaccaggtcgcatttccacacttttagatttgactttgaaagatattgaacgggttctc
tattttgagaattatattgtaacagaatcaggattgacatcccttaagcttcatcagctt
ctttctgaagaagagtatatgcttgctattgatgagttcggggaagatcagtttacagct
atgattggtgctgaggctatttacgaacttctagctggtatggagttggagaaaattgcc
aatgatttgcgtgtcgaattgtctgagacaacttcggaattaaagcagaaaaaactgatt
aaacggcttaagattgttgaaaatttccttgaatctggcaatagaccggagtggatgatt
atgaaaacgattccggttattccaccggatttacgtccgttggttccacttgatggtggt
cgttttgctacgtccgatttgaacgatctttatcggcgggttataaatcgtaataaccgg
ttgaaacgactgattgagttgcgtgctcctgggattattgttcgcaatgaaaaacgtatg
gtgcaagaagctgttgatgcattgtttgataacggccggcgtgggcgtgtgattactgga
gccaataagcgtccgctaaaatctctttcagacatgctaaagggtaagcaagggcgtttc
cgtcaaaacttacttggaaaacgtgttgattactcagggcgttctgttattgtgacaggt
cctgaattaaaattacatcagtgtggtcttcccaaaaaaatggctctcgaattatttaag
ccatttatttatgcacggcttgatgcgaagggatattcatcaactgtaaaacaggcaaaa
aagcttgttgagaaagagcatccagaagtttgggatatcttggatgaggttattcgtgaa
catcctgttttgctgaatcgtgcgccgacattgcaccgtttggggattcaggcctttgag
cctattttgattgagggaaaagctatacagcttcatccattggtgtgtactgcttttaat
gcggattttgatggtgatcagatggcggttcacgttccgctttctcttgaagcacagctt
gaagcgcgtgttttaatgatgtcgaccaataatattcttcatccagccaatggtgcgcca
atcattgttccgtcacaggatatggttcttggtctttactatctttcgattgtttctgaa
aaagaaccaggtgaggggatggctttttctgatatgggtgagctccatcatgctctagaa
aataaggttgtaactcttcacacgaaaatcaaaggccgtgttaaaaatatcgataaggat
ggaaaagaagttgctaaactttatgatacaacacctggtcgtttgattattggtgagctt
ttaccaaaaaacccgaatatttcctttgatattgttaatcaagaaatgactaaaaagaac
atttctaaaatgattgatcaggtttatcgacactgtgggcaaaaagagacggttattttc
tgtgaccgtattatgcagcttggcttttctcatgcttgtcgtgcgggaatttcgtttggt
aaggatgatatggttatccctgatagcaagttacgtttggttgcagaaacggaagctttg
gctaaagagtatgaacagcaatataatgatggtctgattacacaaggtgaaaaatataac
aaagttgtagatgcttgggggaaatgtacggatcgcgttgcagatgaaatgatgaaacgt
attcaggctgtcgaatttgatcctaaaacaggtcgtcagcggccaatgaattcgatctat
atgatgtcgcattccggtgcgcgtggttctgctaaccagatgaaacagttggctggtatg
cgtgggttaatggcaaaaccatcaggtgaaattattgaaacaccaatcatttcaaacttt
aaggaaggcctaactgttaatgagtactttaactcgactcacggtgcacgtaaagggctt
gctgatactgcattaaaaactgccaactctggttatctaacacggcgtcttgttgatgtt
gcacaggatgctattatttcagcagttgattgtggtactgcaaagggtcttaccatgcag
ccaattgttgatgcaggacaaattgttgcgtctcttgggcaacgaattcttggtcgcaca
gcgcttgttgatattctgcatccagtttctggagaggttattgttgaaggtggtgtgatg
attgaggagactgatgttgctaaaattgaagaagccggaatccagtctgttcaaatccgc
tctgctttgacatgtgaaacgcgccttggtgtttgtgccaagtgctatggtcgtgatttg
gcgcgtgggacaccggttaatcagggtgaggccgttggtgttattgccgctcagtcaatt
ggtgaaccaggaactcagcttactatgcgtactttccacttgggggggacggcgcaggtt
gtggattcgtctcatttagaagcatcttatgaaggtacagtagagattcgtaatcgcaat
gtggttcataattctgaaggccatttggtggttatgggacgtaatatggttatccttatc
aaggatggatccggaaaagagcgggttgtgcatcgtattagctatggtgcgcatattttt
gttgatgatggtgatgttgttaaatgtggtcaacgtattgcagaatgggatccctatacg
cgtccaattcttactgaagttgaggggtatgtaggttttgaagacatgattgatggttta
tcagtgactgaaacggctgatgaatctacgggtattacgaagcgtttagtgattgattgg
cgtgctaatccacgtggtgctgatctaaaaccagccattatcatccatgcagacaagaaa
ggtgaagacattgccaaatataagggaggtgaagcccgttatatgatgtcagtggatact
attctttctgttgagcctggtgcccatgttaaggcaggtgatgttattgctcgcttgcca
atggaaagtgctaaaacaaaagatattacaggtggtcttccacgtgtggctgagcttttt
gaagcgcggcgtccgaaagatcatgctattattgccgaagtcagtggtacaattcaattt
ggtcgtggttataaaaataagcgtcgtattatcattgaaccaaatgatgaaactctcgaa
ccagtagaatatttgattccaaagggcaagttgtttcacttccaagaaggcgaccaaatt
gaaaaaggggattatatccttgatggtaatccggctcctcatgatatcttggcgattaag
ggtgttgaagctttggcatcttatcttgttaatgaaattcaggaagtttatcgtttgcag
ggtgttttaattaatgacaagcacattgaagtgattgttcgtcaaatgttgcaaaaagtt
gaaattactgaatctggagattctggttatattccaggtgatcatgttgaccgtattgaa
ttagatgaaatcaatgataatttaattgccgaagggaaaagacctgcttctggtaatcct
atcctgcttgggattacaaaagcatctcttcaaacaccatcctttatttcagcagcatca
tttcaggaaacaactcgagtgcttactgaagcagcagtttccggaaagattgatactttg
caaggtcttaaggagaatgttattgttggtcgtcttattcctgcgggtacaggtggtacg
attgctcaaattcgtcgtattgctgcagttcgtgacaatttgatcgttgatgaacggcgc
aaatctagtgatagccaagtggctaagattatgttaacaaatatgacaaccggagcaact
gctgagtaa
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