KEGG   Bartonella quintana Toulouse: BQ13580
Entry
BQ13580           CDS       T00181                                 
Symbol
rho
Name
(GenBank) Transcription termination factor rho
  KO
K03628  transcription termination factor Rho
Organism
bqu  Bartonella quintana Toulouse
Pathway
bqu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bqu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BQ13580 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bqu03021]
    BQ13580 (rho)
   03019 Messenger RNA biogenesis [BR:bqu03019]
    BQ13580 (rho)
Transcription machinery [BR:bqu03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     BQ13580 (rho)
Messenger RNA biogenesis [BR:bqu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BQ13580 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 NACHT OB_RNB AAA_22 S1CSD-TOTE-2 AAA
Other DBs
NCBI-ProteinID: CAF26816
UniProt: A0A0H3LVH2
LinkDB
Position
complement(1579529..1580794)
AA seq 421 aa
MQGMKLQELKSKNPVELVSFAETLEVENASLMRKQELMFAILKKLASQDIEIIGEGVVEV
LQDGFGFLRSADANYLPGPDDIYLSPAQIQSFSLKTGDTVEGPIRSPKEGERYFALLKIN
TINFEDPEKIRYKIHFDNLIPLYSNERFQMEIQDPTEKDMSSRVIDLISPLGKGQRGLIV
APPRTGKTVLLQNIAHSITTNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAM
RHVQVAEMVIEKAKRLVEYGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPA
MDILKSGTRKEELLVARQDLHKIFVLRRILAPMNVTDAIEFLIDKLKQTKNNSEFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcaaggaatgaaattacaagaacttaaaagtaaaaacccagttgaacttgtttctttt
gctgaaacattagaagttgaaaatgcttccctcatgcgcaaacaagaattaatgtttgct
attttgaaaaaacttgcttctcaagatatagaaattatcggagagggagtcgttgaagtt
ttacaagatgggttcggatttttgcgatccgctgatgccaattatcttccaggacctgat
gatatttatctttcgcctgcacaaattcagtctttttctttaaaaacaggggatactgtt
gaaggtcctatacgtagtccaaaagaaggagagcgttattttgctcttcttaaaattaac
acaatcaattttgaagatcctgaaaaaattcgttataaaattcactttgataatctcatt
cctctttactcgaatgaacgtttccaaatggaaatacaagatcctacagaaaaagatatg
tcatcacgggtaattgacttgatatctccattgggaaaagggcagcgaggattaattgta
gcacctcctaggacaggaaaaaccgttttattacaaaatattgctcattctattactacg
aatcatcctgaatgttatcttattgtccttttaattgatgaacggccagaagaagttact
gatatgcagcgttctgtaaaaggggaagttgtttcttctacttttgatgaaccagcaatg
cgtcatgtacaagtagctgagatggttattgaaaaagccaagcgtttagtcgaatatgga
cgtgatgtcgttattcttcttgattctattacacgtcttgggcgtgcatataatacggtt
gttccttcatcaggtaaggttttgacaggtggtgtggatgcaaatgctctacagcgtcca
aaacgtttttttggggcagcacggaatattgaagaaggtggatctttaactattattgca
acggctttaattgatacgggtagccgtatggatgaagtgatttttgaagaatttaaagga
acaggtaattcagaaattgttctcgatcgtaaagtagctgataagcgcatttttcccgct
atggatattttgaagtctggaacacgcaaggaagagcttttagtagcacgacaagattta
cataaaatttttgttcttcgtcgtattttagcgcctatgaatgtaacagatgcaattgag
tttctgattgataagttaaaacaaacaaaaaataatagcgaattctttgattcaatgaat
acgtag

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