Bacillus velezensis YAU B9601-Y2: MUS_1343
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Entry
MUS_1343 CDS
T02108
Symbol
xpf
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K24072
positive control factor
Organism
bqy
Bacillus velezensis YAU B9601-Y2
Brite
KEGG Orthology (KO) [BR:
bqy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bqy03021
]
MUS_1343 (xpf)
Transcription machinery [BR:
bqy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MUS_1343 (xpf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
HTH_38
HTH_23
GerE
HTH_36
PhyR_sigma-like
UPF0122
HTH_29
Fe_dep_repress
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AFJ61362
UniProt:
I2C3Y8
LinkDB
All DBs
Position
1246406..1246918
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AA seq
170 aa
AA seq
DB search
MEDLLFEYKRTLKETKKWYKQLEEADETVLTSEELKDKKIIRTIITDVEYVIEWLEKGRQ
PGIRRAIDRRDAYQRMLIKDPRIIETYSQALMFEPSANVTEEDRIRLRDALAVLTDREKE
MLLLHKAECFSYERIAALLNVKKSTVQTTVKRALLKIQKQQEQRNQSPAS
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggaagacttactatttgaatataaacgcacgctgaaagagacgaaaaagtggtacaag
cagctggaggaagccgatgaaacggtgcttacttcagaagaactgaaagataaaaaaatc
atcagaacaatcattacagatgtggaatatgtcatcgaatggcttgaaaaaggccggcag
cccggcataagaagagcgatagaccgcagagacgcttatcagagaatgctgattaaagat
ccgagaattatagaaacctattcacaggcgctgatgtttgaaccttccgcaaatgtgact
gaagaagacagaatcagactgcgggacgcattagccgttttaacggatagagaaaaagaa
atgctgctgctccacaaagcggaatgcttttcatatgaacggatcgccgccttgctgaat
gtaaagaaatcaaccgtacagacgacggtcaaacgggcgcttctaaaaattcaaaaacag
caagaacaaagaaatcaatcgcctgcttcataa
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