Bacillus velezensis YAU B9601-Y2: MUS_1418
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Entry
MUS_1418 CDS
T02108
Symbol
ykoV
Name
(GenBank) putative ATP-dependent DNA ligase protein
KO
K10979
DNA end-binding protein Ku
Organism
bqy
Bacillus velezensis YAU B9601-Y2
Pathway
bqy03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bqy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MUS_1418 (ykoV)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bqy03400
]
MUS_1418 (ykoV)
DNA repair and recombination proteins [BR:
bqy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
MUS_1418 (ykoV)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF6058
Motif
Other DBs
NCBI-ProteinID:
AFJ61431
UniProt:
I2C457
LinkDB
All DBs
Position
complement(1304292..1305164)
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AA seq
290 aa
AA seq
DB search
MWKGSISFGLVNIPVKLFAATEDKDIKFRSLHKEDHAPIKYEKICTGCEKSLEPDEIVKG
YEYVKGKYVIMTDEDLKDVKQEHEEKAVEIVDFVQLQEIDPIYFNRSYYVGPGDNGTKAY
TLLREALRTTGKIGIASITIRSKQQLAILRVYDNCIVMESIHYPDEVRNAGHVPGVPEQT
AVNEKELQTAITLINELTTEFDPEQYEDTYRKALLAKINDKLEHEEAGVTPVAAGPREDV
IDLVSALQASIDRTKRPDREQAAPARTKDAASAGGGGKKQKTTRQKAGTS
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagggttcgatcagtttcggtctcgtcaatatcccggtcaagctctttgcggcc
actgaagataaagatataaaattccgcagtcttcataaagaagaccatgcgccgattaaa
tacgaaaaaatctgcaccggatgtgaaaaaagtctggaacctgatgaaatcgtgaaaggc
tatgagtatgtaaaagggaaatacgtcattatgacagacgaagacttgaaagacgtaaaa
caggaacatgaagaaaaagcggttgagattgttgactttgtccagctgcaggaaattgat
ccgatttattttaaccggtcgtattatgtcgggccgggagataacggcacaaaagcctat
acacttctgcgggaagcgctgagaacgacgggtaaaatcgggattgcctccattacgatc
cgctctaaacagcagcttgcgattcttcgcgtgtatgacaactgcatcgtgatggaatcc
attcattatccggatgaagtcagaaatgccggacatgtgccgggcgttcccgagcagaca
gccgttaatgaaaaagagctgcagacggcgattacgttaattaatgaactgacaaccgag
tttgacccggaacaatacgaagacacataccggaaagcccttctcgctaaaattaacgat
aagctcgaacatgaagaagcgggcgtgacaccggttgctgccggcccgcgcgaagatgtc
attgatcttgtcagcgcgcttcaggcaagcattgaccggacgaagcggccggatcgcgaa
caggctgcaccggcgcggacaaaagacgccgcgtcagcaggcggcggaggcaaaaagcaa
aagacgaccagacaaaaagccggaacgtcttaa
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