KEGG   Bacillus velezensis YAU B9601-Y2: MUS_1556
Entry
MUS_1556          CDS       T02108                                 
Symbol
pdhD
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
bqy  Bacillus velezensis YAU B9601-Y2
Pathway
bqy00010  Glycolysis / Gluconeogenesis
bqy00020  Citrate cycle (TCA cycle)
bqy00260  Glycine, serine and threonine metabolism
bqy00280  Valine, leucine and isoleucine degradation
bqy00310  Lysine degradation
bqy00380  Tryptophan metabolism
bqy00620  Pyruvate metabolism
bqy00630  Glyoxylate and dicarboxylate metabolism
bqy00640  Propanoate metabolism
bqy00670  One carbon pool by folate
bqy00785  Lipoic acid metabolism
bqy01100  Metabolic pathways
bqy01110  Biosynthesis of secondary metabolites
bqy01120  Microbial metabolism in diverse environments
bqy01200  Carbon metabolism
bqy01210  2-Oxocarboxylic acid metabolism
bqy01240  Biosynthesis of cofactors
Module
bqy_M00009  Citrate cycle (TCA cycle, Krebs cycle)
bqy_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bqy_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
bqy_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:bqy00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    MUS_1556 (pdhD)
   00020 Citrate cycle (TCA cycle)
    MUS_1556 (pdhD)
   00620 Pyruvate metabolism
    MUS_1556 (pdhD)
   00630 Glyoxylate and dicarboxylate metabolism
    MUS_1556 (pdhD)
   00640 Propanoate metabolism
    MUS_1556 (pdhD)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    MUS_1556 (pdhD)
   00280 Valine, leucine and isoleucine degradation
    MUS_1556 (pdhD)
   00310 Lysine degradation
    MUS_1556 (pdhD)
   00380 Tryptophan metabolism
    MUS_1556 (pdhD)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    MUS_1556 (pdhD)
   00670 One carbon pool by folate
    MUS_1556 (pdhD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bqy04147]
    MUS_1556 (pdhD)
Enzymes [BR:bqy01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     MUS_1556 (pdhD)
Exosome [BR:bqy04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   MUS_1556 (pdhD)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA FAD_binding_2 FAD_oxidored HI0933_like FAD_binding_3 NAD_binding_8 NAD_binding_9 AlaDh_PNT_C Amino_oxidase DAO Thi4 Lys_Orn_oxgnase 3HCDH_N Tox-PAAR-like UDPG_MGDP_dh_N Trp_halogenase
Other DBs
NCBI-ProteinID: AFJ61568
UniProt: I2C4J4
LinkDB
Position
1472421..1473833
AA seq 470 aa
MVVGDFPIETDTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALIN
AGHRYENAKHSDDMGITAENVTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVIKGEAY
FVDSNSVRVMDENSAQTYTFKNAIIATGSRPIELPNFKYSERVLNSTGALALKEIPKKLV
VIGGGYIGTELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTSAM
AKGVEERPDGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGVIKTD
KQCRTNVPNIYAIGDIIDGPPLAHKASYEGKIAAEAISGEPAEIDYLGIPAVVFSEPELA
SVGYTEAQAKEEGIEVVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASA
SDMISELSLAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK
NT seq 1413 nt   +upstreamnt  +downstreamnt
atggtagtaggagatttccctattgaaacagatactcttgtgattggtgcgggacctggc
ggctatgtagctgccatccgcgctgctcagcttggacaaaaagtaacagtcgttgaaaaa
gcaactcttggaggcgtttgtctgaacgtcggctgtattccttcaaaagcgctcatcaat
gcaggccatcgttacgagaatgcaaaacattcagatgacatgggaatcactgctgagaac
gtaacggttgactttacaaaagtccaagaatggaaagcttctgttgtaaataagcttacc
ggcggtgttgcaggtcttttaaaaggaaataaagtggacgttataaaaggggaagcttat
ttcgtagacagcaactctgtccgcgtaatggatgagaactctgcgcaaacatacacattt
aaaaacgcaatcattgctaccggttctcgccctatcgaattgccaaacttcaaatatagc
gaacgcgttctgaactctacaggcgcacttgcgcttaaagaaattccgaaaaagctcgtt
gttatcggcggcggatatatcggtactgagcttggaacagcgtatgcgaacttcggaact
gaattggttattttagaaggcggagatgaaattcttcctggcttcgaaaaacaaatgagt
tctctcgttacccgcagactgaagaaaaaaggcaacgttgaaatccatacaagcgctatg
gctaaaggcgttgaagaaagacctgacggcgtaacagttacattcgaagtaaaaggcgaa
gaaaaaacggttgatgctgattacgtattaatcactgtcggacgccgtccgaacactgat
gagctcggccttgagcaagtcggtatcgaaatgactgaccgcggtgtcattaaaacagac
aagcagtgccgcacaaacgtaccgaacatttacgcaatcggtgacatcattgacggacct
ccattggctcacaaagcgtcttacgaaggtaaaatcgctgcggaagctatttcaggagag
ccggctgaaatcgattacctcggtattccggcggttgtattctctgagcctgaactggct
tctgtcggttacactgaagcacaggcgaaagaagaaggcattgaagtcgttgcagctaag
ttcccgtttgcagcaaacggacgtgcgctgtctcttaacgaaactgacggcttcatgaag
ctgatcactcgtaaagaagacggtcttgtaatcggtgcgcaaattgccggcgcaagcgct
tctgacatgatttctgaattgagcctggcgatcgaaggcggaatgactgctgaagatatc
gcaatgacaattcacgctcacccgacattgggcgaaatcactatggaagctgccgaagta
gcaatcggaagcccgatccatatcgtaaaataa

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