Bacillus velezensis YAU B9601-Y2: MUS_2022
Help
Entry
MUS_2022 CDS
T02108
Symbol
yorL
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bqy
Bacillus velezensis YAU B9601-Y2
Pathway
bqy03030
DNA replication
bqy03430
Mismatch repair
bqy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bqy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MUS_2022 (yorL)
03430 Mismatch repair
MUS_2022 (yorL)
03440 Homologous recombination
MUS_2022 (yorL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bqy03032
]
MUS_2022 (yorL)
03400 DNA repair and recombination proteins [BR:
bqy03400
]
MUS_2022 (yorL)
Enzymes [BR:
bqy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MUS_2022 (yorL)
DNA replication proteins [BR:
bqy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MUS_2022 (yorL)
DNA repair and recombination proteins [BR:
bqy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MUS_2022 (yorL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
Motif
Other DBs
NCBI-ProteinID:
AFJ61988
UniProt:
I2C5R4
LinkDB
All DBs
Position
1963243..1967172
Genome browser
AA seq
1309 aa
AA seq
DB search
MIGCHCHTDKSNIRLLDSTNSVGELLKTAVQMNYKGLAITDHEVLSAHLEAIKTVREMKK
KGDMPADFKLILGNEAYLVDSLEEVRDNYKSGQTKFPHFLMLAIDPIGHEQLRILSSQAW
GNSFYTGTMERVPTVKKDVEELLSKDPGHIIATTACLGSEVNINLLRIKECEESGDIQSI
KQHKLKIHEFITWCVKVFGKDKFFIELQPALSEEQIYCNKKLADIASGYGLKMIVTTDAH
FLRPEDRAIHQAFLNAKDGEREVDSFYEACFVQNVDEIHERMDYMDEEIINEAIENTLLI
GEMIEDYTIEHEPIIPKMALPEFELSHLFKPAYEKYKYIKLMAESDEEQDRYLLKLIEDG
FKAKLMKKDMSKKELHSILKRIDLELGELWEISEKLKQAMSSYYVTVREIINTIWDDECG
GDSLVGAARGSAAGFLVNYLLDITQINPMQYNLPHWRHIHKSRPDLPDIDIDTEGSKRPR
ILKALRDKFGEKRVLQICTFGTEKSKSALQTACRGLGIDNDISQYLSGMIPFERGANWTL
SDCFFGNEELGRKPIKEFIREVEGYPNLKETCLKIEGLTNKRSSHAAGVLIFNDEYTKSN
AMMRTPKGAYITQFNMGDSEAMGSVKYDLLTIEGLDKIRVALDQLIEDNQIESQGTLKRT
YTKYLHPDTLEYNSKRIWEMAGEGEIMDLFQFDTEVGNQSVVKVKPKNLLETAVTNSLMR
LMSEGEEQPVDTYVRFKKDIDHWYQEMRNYNLNSEEMDVLKKHLYKPEEGLYGIADTQES
VMMLSMDKEIAGFSIEESNKLRKGIAKKIKKMIDAIKTMFFEKGRSLGTSENLLKYVWEV
QFKRQFGYSFSSLHTLAYSIIALQELNLNYKYNPLYWSTACLTVNSGGIESEEDQATKKS
AATNYGKVAAAIGNIRKRGIKVDLPDINSANFGFKADTESNSIIFGLKGMNGIGDDVVHQ
IIANRPYSDFDDFIERMFRSSILKKGQVIQLIKGGCFDSFGDRQKIMESFISLISEPKTK
LTLSNLKMLIENNIVPQEYALEIRFFRFKEYISKKVYKTMKSPKDRLFLLDDMSSDFYNQ
HFSESGIVDMINGQLVISERLFKKEYDSKMSKIKDWISTEEALSGLNNCLLKKEWSKYAD
GSLGKWEMDSLSYYYNDHELSGVNFAKYDIADFYELPEEPIKGKPYQWRGKTLYEYETTR
IIGTVLDRDKNKHTITLLTPTGVVTVKQWAGSFGHYNKQISRPVTGGKKEVVEKSWYTRG
TLLMFTGFRRGNNFIPKVYKNSIYSHTVCRIDHVDRKGNISLTTKRAEV
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
ttgattggatgtcactgtcacactgataaaagtaacataagacttctcgattcaacaaac
tcagttggagaattgcttaagacagcggttcagatgaattataaaggattagctattact
gaccatgaggttctttcagcgcatttggaagcgattaagactgtcagagaaatgaagaaa
aaaggggatatgcctgcagattttaaactcatacttgggaatgaagcatatttagtcgat
tcactggaagaagttcgtgataactataagtcaggacagacaaagtttccgcacttttta
atgttggcaatcgatcctataggacatgagcagctaagaatactgtcttcacaagcctgg
ggaaattcattttacacaggaacaatggaaagagtgccaacagttaaaaaggatgtagaa
gaactgcttagcaaagatccaggtcacattatcgctacaacagcttgtctcggctctgag
gtgaatatcaatttactcagaatcaaagaatgcgaagaaagtggagacattcagtcaatc
aagcagcacaaattaaaaattcatgagtttataacatggtgtgtaaaagtctttgggaaa
gataagttctttattgagcttcagccagctttaagtgaagagcagatttattgtaataag
aaacttgctgatatagctagcggctacggattgaaaatgattgtcacaactgatgcacac
tttcttagaccggaagacagggcaattcatcaagcttttttaaacgccaaggatggagag
agagaagtcgactctttttatgaagcatgttttgttcagaatgttgatgaaattcatgag
agaatggactacatggacgaagagatcatcaatgaggccattgaaaacacattgctaatt
ggagagatgattgaagactatactattgagcacgaaccaattattccgaaaatggcttta
cctgagtttgaattatcccatttgttcaagccggcatatgagaaatataaatatataaaa
ttaatggcggaatctgatgaagaacaggacaggtatttgttaaagctaattgaagatggt
tttaaggcaaagctaatgaaaaaggatatgtctaaaaaagaattgcactcaattttaaaa
cggattgatctagaattgggtgagctttgggaaattagtgagaagctaaaacaggccatg
tcatcttattatgttacagtccgggaaatcatcaatacaatttgggatgatgaatgtgga
ggagacagcttagttggagcagcaagggggagcgcagcaggtttcttagtaaattacttg
ttagatattacgcaaattaacccaatgcagtacaaccttcctcattggcgtcacatacat
aaatcgagaccagatttgccggatatcgatattgatactgaaggatctaagcgtccaaga
atcttaaaagcattaagggacaagtttggagaaaaaagagtactgcagatttgtactttt
ggaactgagaaatctaaatccgcacttcaaactgcttgcagaggcttaggaattgataac
gatatctctcaatatttaagtggaatgattccatttgaaaggggagcaaactggacactc
tccgattgtttctttggcaatgaagaattaggaagaaagcctattaaggaatttattaga
gaggtcgagggatatcccaatctgaaagaaacctgtctgaaaattgaaggtttaactaac
aaacgatcttctcatgcagccggcgtcctaatattcaatgatgaatacaccaaatcaaac
gcaatgatgaggacaccaaaaggagcatatatcacacagttcaatatgggcgacagtgaa
gcaatgggttcagttaagtatgatctattgactattgagggattagataaaattcgagta
gccttagaccagcttatcgaagacaatcaaatagagtcccaaggaactttaaaaagaact
tatacaaagtatttgcatccagacactttggagtataactctaagagaatatgggaaatg
gctggcgaaggagaaataatggatttgtttcagtttgatacagaagtgggcaaccaatcc
gttgttaaagttaagccgaaaaacttattggaaacagctgtaacaaattctttaatgaga
ctgatgtcagaaggggaagaacagcctgtagatacatatgtaagatttaaaaaagacatc
gaccactggtatcaagaaatgagaaattacaatttaaattcagaagaaatggatgtactt
aaaaaacatctatataaaccagaagaaggtctatacgggatcgcagatacacaggaatca
gttatgatgctatccatggacaaagaaattgctgggtttagcattgaagaatctaataag
ctaagaaaagggatagccaaaaaaatcaaaaaaatgattgatgcaataaagacaatgttt
tttgagaaagggcgaagcttgggaacatctgaaaaccttttaaaatatgtctgggaagta
caatttaaaagacaattcggatactcgttcagcagcctgcatactcttgcatattctatt
attgctcttcaagaattgaaccttaactataagtacaacccattgtattggagcacagct
tgtttaacggtcaacagtggtggaattgagagcgaagaagatcaggccaccaaaaaatca
gccgccacaaactatggtaaagtggctgcagctatagggaatatcagaaaaagaggaatt
aaagttgatttacctgatatcaatagcgcaaattttggttttaaagcagatacggaaagt
aactctattatatttggattaaaaggaatgaatggaatcggtgacgatgttgttcatcaa
ataattgcaaataggccatacagtgactttgacgacttcatcgaaagaatgttcagaagt
agcatcctaaaaaaaggacaggtaatccaactaataaaaggtggttgttttgattctttt
ggtgatagacaaaaaataatggaatcctttattagtttgatatctgagcctaaaactaaa
ctaactttatcgaatttaaaaatgctaattgaaaacaatattgttccccaggaatatgct
ttagaaattagattcttccgtttcaaagaatacatcagcaaaaaggtttacaagacaatg
aaatctccaaaagacaggcttttcttattagatgatatgtcttccgacttttacaatcag
catttcagtgaaagcggaatcgttgatatgattaatgggcaacttgttatatcagaaagg
ttgtttaaaaaagaatatgacagtaaaatgtccaaaatcaaagactggatatcgactgaa
gaagccttaagtgggcttaacaattgcttacttaagaaagagtggtctaagtatgccgat
ggatctcttggtaaatgggagatggattcattgagttattactataacgatcatgaactt
tctggtgttaactttgctaagtatgatattgctgatttttatgagttgccagaagagcca
atcaaagggaaaccatatcaatggcgaggaaaaactctgtatgaatatgaaacgactcga
attataggaaccgtattagacagggataaaaacaagcacacaatcacactccttacacct
acaggggtggttacagttaaacagtgggctggcagctttggacattataataaacagatt
tctcgacctgtcactggcggcaaaaaagaggttgttgagaagtcatggtataccagagga
actttgctcatgttcactggattcagaagaggcaataactttatccctaaagtatataag
aacagtatctatagccacacggtctgtagaattgatcatgttgataggaaagggaatatc
agtctaacaaccaaaagagctgaggtatag
DBGET
integrated database retrieval system
