Bacillus velezensis YAU B9601-Y2: MUS_2267
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Entry
MUS_2267 CDS
T02108
Symbol
yocI
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bqy
Bacillus velezensis YAU B9601-Y2
Pathway
bqy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bqy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUS_2267 (yocI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bqy03019
]
MUS_2267 (yocI)
03400 DNA repair and recombination proteins [BR:
bqy03400
]
MUS_2267 (yocI)
Enzymes [BR:
bqy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MUS_2267 (yocI)
Messenger RNA biogenesis [BR:
bqy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MUS_2267 (yocI)
DNA repair and recombination proteins [BR:
bqy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MUS_2267 (yocI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
AAA_22
Chalcone
Motif
Other DBs
NCBI-ProteinID:
AFJ62213
UniProt:
I2C6D9
LinkDB
All DBs
Position
complement(2226186..2227964)
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AA seq
592 aa
AA seq
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MLDKAQSLLAHYFGYDSLRAGQKQAIQSVAEERKNTVCIMPTGGGKSICYQIPALLFEGT
TIVISPLISLMKDQVDALEEAGIAAAYINSTQTSRDIHERLTGLKQGAYRLFYITPERLT
SSEFIHILQNITVPLVAIDEAHCISQWGHDFRPSYRNIEILFNELKEPPVIIALTATATP
EVHDDICKQLHIKKEQTVYTGFARENLTFKVVKGENKDRFIERYLEKNKHEAGIIYTATR
KETDRLYEKLKRSGINAGRYHGGLADDDRKDQQERFLNDQIQVMVATSAFGMGIDKSNIR
FVLHAQIPKDMESYYQEAGRAGRDGLNSECVLLFSPQDIMVQRFLIDQSAAGEEKQKQDL
KKLRQMVDYCHTEDCLQRFILKYFGENEAEACEACGNCTDTRTAHDVTKEAQMVLSCIIR
MNERFGKTMVAQVLSGSKNKKVLENSFSSLSTYGIMKHQSAAEISDFIEFLISDEYIRMA
DGTFPTLMVTQKGRDVLLGKSAVSRKEALQAAAVTENDELFELLRRLRKEIAAEQGVPPF
VVFSDQTLKEMSAKLPKTDQDLLSVKGVGEQKRLKYGAVFLEEIRNYVRETE
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgctggataaagcccaatcccttctggcgcattattttggttacgacagtctacgcgcg
ggccaaaagcaggcgatacaatcagttgcagaggagagaaaaaacacggtctgcattatg
ccgacggggggcggaaaatcaatctgctatcagattcccgcactgctgtttgaaggaacc
acaatcgttatttcccctcttatttccttaatgaaagatcaagtcgacgcgcttgaagaa
gcgggtatcgcggcagcttatattaacagcacccagacaagccgtgacattcatgagcgc
ctgaccggtttgaaacaaggggcttaccggctcttttacattacaccggagcgtttgact
tcttctgaattcattcacatcctgcagaatattacggttcctcttgtcgccattgacgaa
gctcactgtatatcgcaatggggacatgatttcaggccgagttaccggaatatcgaaatc
ctttttaatgaattaaaagaaccgcccgtcatcatcgcattaacggcgacggctacgcct
gaggttcatgatgatatctgcaagcagcttcatattaagaaagaacaaactgtatatacc
ggttttgccagagagaatttaacgtttaaagtagtaaagggcgaaaacaaagaccggttt
atcgagcggtatctggaaaaaaataaacacgaagccggcattatatatacagcgacaaga
aaagaaaccgaccgtttatatgagaaattaaagcgcagcggcatcaatgccggccgttat
cacggcggattggcggatgatgacagaaaagaccagcaggagcggtttcttaacgatcag
atacaagtgatggtagctacgtccgctttcggaatgggaatcgataagagcaacatcagg
ttcgttttgcacgcgcagattccgaaagatatggagagctattaccaggaagccggacgg
gccgggcgcgatggtcttaacagcgagtgtgtgctcttattttcgccgcaggatattatg
gtgcagcgttttttaatagaccaatcggccgccggagaagaaaaacaaaagcaggatctc
aaaaaactgagacagatggtggattactgtcatacggaagattgcctgcagcggtttatt
ctgaagtatttcggcgagaatgaggcggaagcttgcgaagcatgcggcaattgcactgat
acaaggaccgcccatgacgtcacaaaagaagcgcagatggtattatcatgcatcatcaga
atgaatgagcgcttcggaaaaacgatggtggcgcaggtgcttagcggctcaaaaaataaa
aaagtgctggaaaacagcttcagcagcctgtccacttacggcattatgaagcatcaatcc
gcagcggaaatcagtgattttatcgaattccttatttcagatgaatatatcagaatggcg
gacggcacatttccgacgcttatggtcacccaaaaaggcagggacgttctgcttggaaaa
agcgcagtctcgagaaaagaagccttacaggccgccgccgttaccgaaaatgatgaatta
tttgagcttctccggcgtctccgcaaagagattgcagctgaacagggtgtgcctccattt
gtcgtgttctcggatcagacgttaaaagaaatgtcggcgaaacttccgaaaacagatcag
gatcttctttccgtaaaaggggtcggggaacaaaaaagattgaaatacggagcggttttt
ttagaagaaatccgaaattatgtaagagaaacagagtga
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