Bradyrhizobium sp. ORS 278: BRADO0083
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Entry
BRADO0083 CDS
T00516
Name
(GenBank) putative helicase-exonuclease type V protein family, addB subunit
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bra
Bradyrhizobium sp. ORS 278
Brite
KEGG Orthology (KO) [BR:
bra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bra03400
]
BRADO0083
Enzymes [BR:
bra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BRADO0083
DNA repair and recombination proteins [BR:
bra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BRADO0083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
CAL74054
UniProt:
A4YJH8
LinkDB
All DBs
Position
95216..98362
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AA seq
1048 aa
AA seq
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MRVFTVPISAPFLRSVIAALVDGRLVDGFEARSDPARLATATLYLPTRRSLRVAREMFLD
ELRTDAAVLPRLVALGDIDEDELAFAEDRDAFLGPAPLELPERLDDLQRRLTLARLVAAW
AKTPVSAPLVIGGPASTLALAGDLARLIDDIVTRGVSWDALDQLVPDQLDKYWQFSLEFL
RIARTAWPAYLQEIERIEPAARRDLLIAAEAARLSAHPDGPVIAAGSTGSMPATAKFLLA
VAKLPHGAVVLPGLDTDLDEAAWSSIGGAKDRSGRVITPPAVNHPQYAMHLLLRRFGLER
RDVLRLAPPGRGGREVLISEAMRPSEATAIWHERLRQFDIAANIAEAMDNLSVVAAPNPE
MEALAIAIAMREARHLGKSAALVTPDRALARRVMAALTRWHLTFDDSGGDALLETPAGIF
ARLAAEAAARGLEPPTLLALLKHPLCRLGRNAYGWKHAIETLELALLRGTRPQAGTGGLA
RDFARFRDEHAKLHQGEASSLHRAEPRARLKPDQLDQAAALIAQLQTALAPLENLASPRP
QDFAELAARHREVLIALSTDDVGLGTAFTDRDGAALARCFDDLLASGERCGLMAPLSDYP
DLFHTAFSDRAVRRPERHGAQLQIYGPLEARLMQTDRMIIGGLVEGIWPPAPRIDPWLSR
PMRHQLGLDLPERRIGLSAHDFAQLLGAPEVILTHAAKSGGAPAVASRFLHRLQAVAGDA
QWKAATARGETYVRYAEVLDQPREVKPIPQPAPKPPLEARPLRMSVTAIEDWLRDPYTIF
ARYILRLDPLDPVDMPLSAADRGSAIHEAIGEFTQTFAKELPLHPAHALRVIGEKHFAPL
MERPEARALWWPRFQRIAGWFAAWETARREHIGAITAEIRGEIGIPLGKDRTFMLSARAD
RIEQRAEGTYAILDYKTGQPPTAKQVRMGLSPQLTLEAAILREGGFDGIPAGSLISQLVY
VRLSGNNPPGEERILELKINKSDTPQHPDQAAQEARNKLEELIRSFEDVNQGYTSLNLSM
WANRYGSYDDLARIKEWSAAGGLGVEEW
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcttcaccgttcccatttcggcgccgttcctgcgcagcgtgatcgcggcgctg
gtggacggccggctggtcgacggtttcgaagcccgcagcgatccggcgcggctcgcgacg
gccacgctctatcttccgacgcgtcgttcgctgcgtgtcgcgcgcgagatgtttctcgac
gagctgaggaccgacgccgcggtgctgccgcggctggtggcgctcggcgacatcgacgag
gatgagctggcgtttgcggaagatcgcgacgcgttcctcggccccgcgccgctggagctt
ccggagcggctcgatgatctgcagcgtaggctcacgctggcgcggctggtcgcggcctgg
gccaagacgccggtgtcggcgccgctggtgatcggcggtcccgcctcgacgctcgcgctc
gccggcgacctcgcgcggctgatcgacgacatcgtgacacgcggcgtatcgtgggatgcg
ctcgaccaactggtgcccgatcagctcgacaaatactggcagttttcgctggagttcctg
cgcatcgcgcgcacggcgtggccagcctatctgcaggagatcgagcgcatcgagccggcg
gcacggcgcgatctcctgatcgcagccgaagccgcgcgcctctcggcgcatcccgatggg
ccggtgatcgccgcaggctcgaccggctcgatgccggcgacggcaaagttcctgctcgcg
gtcgccaagttaccgcatggcgcggtggtgctgccggggctcgacaccgatctcgacgaa
gccgcgtggagctcgatcggcggcgcgaaggatcgctcggggcgcgtgatcacgccgccc
gcggtcaaccatccgcaatatgcgatgcacctgctgctcaggcgcttcggcctggagcgg
cgcgacgtacttcgccttgcgccgccgggccggggcggccgcgaggtgctgatctccgaa
gcgatgcggccgtcggaagcgaccgccatctggcatgagcgactgcgccagttcgacatc
gccgccaacatcgcggaggcgatggacaatctgtccgtggtcgccgcgcccaatccggag
atggaggcgctggcgatcgcgatcgcgatgcgcgaggcccgccatctcggcaagtccgcg
gcactggtgacgccggaccgcgcgctggcgcgccgcgtgatggccgcgctgacgcgctgg
cacctgaccttcgacgattccggcggtgatgcgctgctggaaacaccggccgggatcttt
gctcgcctcgccgccgaagctgccgcgcgcgggcttgagccgccgaccctgctggcgctc
ctcaagcatccgctgtgccggctcggccgcaacgcctacggctggaagcatgcgatcgaa
accctggagctggctctgctccgcggcacccgtccgcaagccggcaccggcggcctcgcg
cgcgacttcgcccgcttccgcgacgagcatgccaagctgcaccagggcgaagcgtcctcg
cttcatcgtgccgaaccgcgcgcgcgacttaagcctgatcagctcgaccaggcggccgcg
ctgatcgcgcaattgcagacggcgctcgcgccgctcgaaaatctcgcctccccgcgtccg
caggatttcgccgagctcgccgcgcgccaccgcgaggtactgatcgcgctctccaccgat
gacgtcggcctcggcaccgcgttcaccgatcgcgatggcgcggcgctggcgcgctgcttc
gacgatctgctcgcctccggcgagcgctgcggcctgatggcgccgctgtcggactatccg
gacctgttccacaccgccttttccgatcgcgcggtgcgccgccctgagcgccacggcgcg
cagctgcagatctatggcccgctcgaagcgcgcctgatgcagaccgatcgcatgatcatc
ggcggtctggtcgagggcatctggccgccggcgccgcgcatcgatccctggctcagccgc
ccgatgcggcatcagctcggcctggacctgcccgagcgccgcatcggtctctccgcacac
gacttcgcgcagctgctcggcgcgcccgaagtgatcttgacccatgcggcaaaatccggc
ggcgcgccggctgtcgcttcgcgctttctgcatcgactccaggcggttgccggcgacgca
caatggaaggccgcgacggcgcgcggcgaaacttatgtccgctacgccgaagtgctcgac
cagccgcgggaggtgaagccgataccgcagccggcgccgaagccgccgctcgaggcccgc
cccctgcgcatgtcggtgaccgccatcgaagactggctgcgcgatccctacacgatcttc
gcgcgctacatcctgcgactcgatccgctcgaccccgtcgacatgccgctgtcggcggcc
gatcgcggctccgcgatccacgaagccatcggcgagttcactcagaccttcgccaaggag
ctgccgctgcatccagcccatgcgctgcgcgtgatcggcgaaaagcattttgcgccgctg
atggagcgccccgaggcgcgcgcactgtggtggccgcgcttccagcgcatcgccggctgg
ttcgcggcgtgggagaccgcgcgccgcgaacatatcggcgcgatcaccgctgagatccgc
ggcgagatcggcattcccctcggcaaagaccgtaccttcatgctgtcggcgcgcgccgac
cgcatcgagcagcgcgccgagggcacctacgccatcctcgactacaagaccggccagccg
ccgaccgcaaagcaggtccgcatgggcctgtcgccgcagctcaccttggaagctgcgatc
ctgcgcgagggcggcttcgacggcattcccgccggcagcctgatcagccagctcgtttat
gtccggctgtccggcaacaacccgccgggcgaggagcgcattcttgagctgaagatcaac
aagagcgacacgccgcagcatcccgaccaggccgcgcaggaggctcgcaacaagctggaa
gagctgatccgcagcttcgaggacgtcaaccagggctacacctcgctgaacctgtcgatg
tgggcgaaccgctacggcagctatgacgacctcgcccgcatcaaggaatggtcggcggcc
ggcggcctgggggtggaggaatggtga
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