Bradyrhizobium sp. ORS 278: BRADO0084
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Entry
BRADO0084 CDS
T00516
Name
(GenBank) putative helicase-exonuclease type V protein family, addA subunit
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
bra
Bradyrhizobium sp. ORS 278
Brite
KEGG Orthology (KO) [BR:
bra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bra03400
]
BRADO0084
Enzymes [BR:
bra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BRADO0084
DNA repair and recombination proteins [BR:
bra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BRADO0084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_19
DEAD
Ribosomal_L18
DUF3638
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CAL74055
RhizoBase:
BRADO0084
UniProt:
A4YJH9
LinkDB
All DBs
Position
98359..101829
Genome browser
AA seq
1156 aa
AA seq
DB search
MKAPRPIPQAVRDAQTRASNPAASAFVSANAGSGKTHVLVQRVIRLLLDGVPPEKILCIT
FTKAAAANMAERVFSTLGHWVTLDDGALDSAIKSTGILTSDKKLRASARKLFASALETPG
GLKVQTIHALCTRLLQQFPFEANVPARFSVLDERDQTEMMERANLKVLLNAARAPDSPIG
RALQIAMANAADSTFKEVVREACLSRDHFMAWTDGAGRVEVAAQHLGEVLGIGAGETLDA
IERDILDGPNLPRANWTEIAARLDGGAKTDQKQADQLRAALAFSGSDRVDEYLRVFLTDD
KEPRRSVLTKKFAESNPGLAGLFDAEARRLDHLIEKRRAAVVRDRTEALLQIATAAAANY
RREKDERGLLDYDDLIDKTLVMLNRVSAGWVHYKLDRGVDHVLIDEAQDTSPRQWDIVAH
IIEEFTSGAGARDGLTRTIFAVGDEKQSIFSFQGADPHEFDARRRQLQKRFTDAGLLFDP
VSFTYSFRSGPTVLHAVDHVFREREVYSSIHSPDIGYPIHNALTDAGPSLVELWSLCERD
DRKEIEGWRAPFDGVSVTSPEVKLSRRIQAEIKRLIRVGTMTGHDGARRRLSYGDMLILV
RRRGTAFDAVIQALKHAGIPVAGADRLKLTEHIAIIDLMNLADALLLPQDDLALATALKS
PLFGLDDDDLFKLAWQRRGSLREALSAHAADDPRLQAVVRRLQQCERRAAEDTPFAFYAW
LLGGDGGRRRILARLGHEANDALDEFLELALSYERKAPASLQGFVAWLRAADTEVKRDME
ISRDEVRVMTVHGAKGLEASVVFLVDTTSSPADSQRLRLIHVPHGDREIVVWAGRKADDP
QAVVAARAAMLKETEDEYRRLLYVAMTRAADRLVIGGCMPGNMNNVRGGSWYDLMARGLD
AAGLQVEVIETEDGPVKRYARPEDIAETAKDEARQMAESAVELPAWLRTAAVEAPGDVAV
LRPSDPSSDERPVRTGESLAARSLAMQRGTLVHRLLQSLPDVPPERRRDAALRYLLRNAP
DWPEDERDKLTARVLTVIADPRFAAVFAPGSRAEVSIVGRLAHPGQPRTLVSGQIDRLVV
TEAEVLIVDFKTNQQPPSELADVPEAYLRQLALYRAVLGQLYPGRAVRAALLWTEVPDFM
ELPPSALDAVLPSQHD
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgccccgccccattccgcaggccgtgcgcgacgcgcagacgcgcgcgtcgaac
ccggcggcctcggcgttcgtgtcggccaatgccggctcgggcaagacgcatgtgctggtg
cagcgcgtgatcaggcttctgctcgacggcgtgccgccggagaagatcctctgcatcacc
ttcaccaaggccgccgccgccaacatggccgagcgcgtgttctcgacgctcggccattgg
gtgacgctcgacgatggcgcgctcgacagcgcgatcaagtcgaccggaatcctcacatcg
gacaagaagctccgcgcctcggcgcgaaaactgtttgccagcgcgctggagacgccgggc
ggattgaaggtgcagaccatccacgcgctgtgcacccggctgctgcagcagtttccgttc
gaggccaatgtgccggcgcggttctcggtgctcgacgagcgcgaccagaccgagatgatg
gagcgtgccaatctcaaagtgttgctgaatgcggcgcgcgctcctgacagcccgatcggc
cgcgcgctgcagatcgcgatggccaatgccgcggactcgaccttcaaggaggtcgtgcgc
gaggcgtgcctgagccgtgatcatttcatggcctggaccgatggcgccggtcgcgtcgag
gtcgccgcgcagcatctcggcgaagtcctcggcattggtgccggcgagaccctggatgcg
atcgagcgcgacattctcgacggtcccaatctgccgcgcgcgaattggaccgagatcgcc
gcgcggctcgacggcggggcgaagaccgatcagaagcaggcggaccagttgcgcgccgcg
ctggcgttctcgggcagcgatcgggtcgacgaatatcttcgcgtgttcctcaccgacgac
aaggaaccccgcaggtcggtactaaccaagaagttcgccgagagcaatcccggcctcgct
ggtctgttcgacgcggaagcgcggaggctcgaccacctgatcgaaaagcgccgcgccgcc
gtcgtgcgcgaccgcacggaggcgctgctgcagatcgccactgcggcggccgcgaactat
cggcgcgagaaggacgagcgcgggctgcttgactatgacgacctgatcgacaagacgctg
gtcatgctcaaccgcgtctccgccggctgggtgcattacaagctcgaccgcggcgtcgat
cacgtgctgatcgacgaggcgcaggacacgagcccgcggcaatgggacatcgtcgcccac
atcatcgaggagttcacgtcgggcgccggtgcacgcgacgggctgacccgcacgatcttc
gcggtgggcgacgagaagcagtcgatcttctctttccagggcgccgacccgcatgaattc
gatgcccgacggcgccagttgcagaagcgcttcaccgatgccgggctgctgttcgatccg
gtctccttcacctattcgttccgctccgggccgacggtgctgcacgcggtcgaccacgtg
ttccgggagcgcgaggtctacagcagcatccattcgcccgatatcggctaccccatccac
aatgcgctgaccgatgccgggccgagcctggtcgagctgtggtcgttgtgcgagcgcgac
gaccgcaaggaaatcgagggctggcgcgcgccgttcgacggcgtctcggtgacgagcccc
gaggtcaagctgtcgaggcgcatccaggccgagatcaagcggctgatccgcgtcggcacc
atgaccgggcatgacggcgcgcggcggcggctgagctatggcgacatgctgatcctggtg
cgccggcgcggcaccgcgttcgatgccgtcatccaggcgctgaagcatgccggcattccc
gtcgcgggtgcggaccgcctcaagctcaccgagcacatcgcgatcatcgatctgatgaac
ctcgccgacgcgctgctgctgccgcaggacgatctggcgctggcgaccgcgctgaagagc
ccgctgttcggcctcgatgatgacgatctgttcaagctcgcctggcagcgtcgcggcagc
ttgcgcgaggcgctgagcgcgcatgcggctgatgatccgcggctgcaggccgtcgtccgg
cgtctgcagcaatgcgagcgccgcgcggccgaggacacgccgttcgcgttctacgcctgg
ctgctcggcggcgatggcggccggcgccgcattctggctcggctcggccacgaggccaat
gacgcgctcgacgaattcctcgagctggcgctgtcctacgagcgcaaagcgccggcctcg
ctgcagggcttcgtcgcttggctgcgcgccgccgacaccgaagtgaagcgcgacatggag
atctcgcgcgacgaggtgcgtgtcatgaccgtgcacggcgccaaaggcctggaagcgtcg
gtggtgttcctggtcgacacgacatcgtcgccggcggattcgcagcggctgcggctgatc
cacgtgccgcatggcgaccgcgagattgtcgtatgggccggccgcaaggcggacgatccg
caagccgtcgtggcggcgcgcgcggcgatgctgaaggagaccgaggacgaataccgacgg
ctgctctacgtcgcgatgacgcgggccgccgatcgcctcgtcatcggcggctgcatgccg
ggcaacatgaacaacgtgcgcggcggcagctggtacgacctgatggcgcgggggctcgat
gcggcggggttgcaggtcgaggtgatcgagaccgaggacgggccggtcaagcgctacgcg
cggcccgaggacatcgccgagaccgccaaggacgaggcgcggcagatggcagagagcgcg
gtcgagctgccggcctggctgcgcacggccgcggtggaggcgcccggcgacgtcgccgtg
ctccggccgtccgatccctcatccgatgagcggccggtgcgaacgggcgaatcgctggcg
gcccgcagtctcgcgatgcagcgcggcaccttggtgcaccgcctgctgcagtcactgccc
gacgtgccgccggaacggcggcgcgacgccgcgctgcgctaccttcttcgcaatgcgccg
gactggccggaggacgagcgcgacaagctcaccgcgcgcgtgctcaccgtgatcgcggac
ccccgcttcgccgcggtgttcgcgcccggcagccgcgccgaggtgtcgatcgtcggccgg
ctcgcgcacccgggccaaccgcgaaccctggtgtccggccagatcgaccgtctcgtggtc
accgaggccgaggtgctgatcgtcgacttcaagaccaaccagcagccgccctccgaactg
gccgacgtgcccgaggcctatctccgccagctcgctctgtaccgcgccgtgctcggccaa
ttgtaccccggacgggccgtccgggccgccctgctctggacggaagtccctgatttcatg
gagcttcccccctccgcgctggacgccgtgctgccatcccagcacgactga
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