KEGG   Bradyrhizobium sp. ORS 278: BRADO0113
Entry
BRADO0113         CDS       T00516                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
bra  Bradyrhizobium sp. ORS 278
Pathway
bra02020  Two-component system
bra02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:bra00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BRADO0113 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    BRADO0113 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bra03021]
    BRADO0113 (rpoN)
Transcription machinery [BR:bra03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BRADO0113 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: CAL74084
LinkDB
Position
complement(126924..128564)
AA seq 546 aa
MALTQRLEFRQSQSLVMTPQLMQAIKLLQLSNLDLSTFVEEELERNPLLERANDGPEAPV
AGEQQMAERGEFSEGGEASGDDFGDGAGSSGGESYESAPEDWMSRDLGSRTEIEQTLDTG
LDNVFSEEPAEAAARNAQDAAPTTYTEWGGGASGDEDYNLEAFVAAETTLSDHLAEQAAV
AFVSPADRMIGQYLIDLVDEAGYLPVDLGQAADRLGAEQADVDAVLGVLQTFDPPGICAR
NLSECLAIQLRELDRYDPAMQALIEHLDLLAKRDFAALRRLCGVDDEDLVDMIGEIRRLD
PKPGLKFGTTRTQTMVPDVYVRPGPDGGWLVELNSDTLPRVLVNQVYYSELSKTIRKDGD
KSYFTDCLQNATWLVRALDQRARTILKVATEIVRQQDGFFTHGVAHLRPLNLKAVADAIQ
MHESTVSRVTANKYMATNRGTFELKYFFTASIASADGGEAHSAEAVRHHIKQLIDAEDPS
AILSDDTIVEKLRAAGIDIARRTVAKYREAMRIPSSVQRRRDKQSMLAHALSSPASADRT
RDTASV
NT seq 1641 nt   +upstreamnt  +downstreamnt
atggcgttgacgcagagactagaattccgccagtcacagtcgctggtgatgacgccgcag
ctgatgcaggcgatcaagctgctgcagctgtccaacctcgacctctccacgttcgtcgaa
gaagagctcgagcgcaatccgctgctcgagcgcgcgaacgatggcccggaagcgccggtc
gccggcgagcagcagatggccgagcgcggcgagttctccgaaggcggcgaagccagcggc
gatgattttggcgatggcgcgggcagcagcggcggcgagagttacgagagcgcgcccgag
gactggatgagccgcgatctcggctcgcgcacggagatcgaacagacgctcgataccggg
ctcgacaacgtgttctccgaggagccggcggaggccgcggcgcgcaatgcgcaggacgcc
gcgccgaccacctacacggaatggggcggcggcgcctccggcgacgaagactacaacctc
gaagccttcgtcgcggcggaaaccacgctgtcggatcatctcgccgagcaggccgcggtc
gccttcgtctcgccggccgatcgcatgatcggccagtacctgatcgatctcgtcgacgag
gccggctatctgccggtcgatctcggccaggccgccgaccgtctcggcgccgagcaggcc
gatgtcgatgcggtgctcggcgtgctgcagaccttcgatccgcccggcatctgcgcgcgc
aatctgagtgagtgtcttgcgatccagctgcgcgagctcgatcgctacgatccggcgatg
caggctctgatcgagcacctcgacttgttggcgaagcgcgatttcgccgcacttcgcagg
ctgtgcggcgtcgacgacgaggacctcgtcgacatgatcggcgagatccgcaggctcgat
ccgaagcccggcctcaaattcggcaccacgcgcacgcagaccatggtgcccgacgtctat
gtgcgtccgggcccggatggcggctggctggtcgagctcaacagcgacacgctgccgcgc
gtcctggtgaaccaggtctattactccgagctgtcgaagacgatccgcaaggacggcgac
aaatcctacttcaccgattgcctgcagaacgcgacgtggctggtgcgcgcgctcgaccag
cgcgcgcgcacgatcctgaaggtcgcgaccgagatcgtgcggcagcaggacggcttcttc
actcatggcgtcgcacatctccggcccttgaacctgaaggccgttgcggatgcgatccag
atgcacgaatcgacggtgtcgcgcgtcaccgccaacaaatacatggcgaccaatcgcgga
accttcgagctgaaatatttcttcaccgcttcgatcgcctcggccgatggcggcgaggcg
cattcagccgaagcagtgcggcatcacatcaagcaactgatcgatgcggaagatccctcc
gcaattctctccgacgataccatcgtcgagaagctgcgcgctgccggcatcgacatcgcc
cgccgcacggtcgcgaaataccgggaggcgatgcggattccgtcgtcggtccagcgccgc
cgcgataagcagagcatgctggcccatgccctgtcgtcgcctgccagcgccgaccgcacc
cgggataccgcgtcagtttga

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