Bradyrhizobium sp. ORS 278: BRADO0117
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Entry
BRADO0117 CDS
T00516
Name
(GenBank) putative 3'-5' exonuclease family protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bra
Bradyrhizobium sp. ORS 278
Brite
KEGG Orthology (KO) [BR:
bra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bra03016
]
BRADO0117
Enzymes [BR:
bra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BRADO0117
Transfer RNA biogenesis [BR:
bra03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BRADO0117
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
RNase_T
Motif
Other DBs
NCBI-ProteinID:
CAL74088
UniProt:
A4YJL2
LinkDB
All DBs
Position
complement(131761..132375)
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AA seq
204 aa
AA seq
DB search
MTVRLHRGDLPDLSRYTSSVAIDTETMGLNPHRDRLCVVQLSPGDGSADVVQIPKGHTDA
PNLKTLLGNTAITKIFHFARFDVATLFHTFGVMPQPVYCTKIASRLARTYTDRHGLKDLV
RELLNIDLSKQQQSSDWGADSLSEPQLAYAASDVLHLHALREKLDVMLAREGRLALAQAC
FAFLPHRATLDLGGFEADDIFAHS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttcgcctgcatcggggcgacctgcccgatctctcccgctacacctcgtcggtc
gcgatcgacaccgagacgatggggctcaatccgcaccgcgaccggctgtgcgtggtgcag
ctgtcgcccggcgacggctcggccgatgtggtgcagatccccaaggggcacaccgacgcg
ccgaatttgaagacgctactcggcaataccgccatcaccaagatcttccacttcgcgcgc
ttcgacgtcgcgacgctgtttcatactttcggggtgatgccgcaaccggtctattgcacc
aagatcgcgtcgcggctggcacgcacctataccgaccgccacggactgaaggatctcgtc
cgcgagctgctcaacatcgatctgtccaagcagcagcagtcgagcgactggggcgccgat
agcctgagtgagccgcagctggcctatgcggcctccgacgttctgcatctgcatgcgctc
cgcgagaagctcgacgtgatgctggcgcgcgaaggccggctggcgctggcgcaggcctgc
ttcgccttcctgccgcatcgcgcgacgctcgatttgggcggattcgaggccgacgacatc
tttgcgcattcgtga
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