Bradyrhizobium sp. ORS 278: BRADO0345
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Entry
BRADO0345 CDS
T00516
Name
(GenBank) conserved hypothetical protein; putative eukaryotic-like DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bra
Bradyrhizobium sp. ORS 278
Brite
KEGG Orthology (KO) [BR:
bra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bra03032
]
BRADO0345
03400 DNA repair and recombination proteins [BR:
bra03400
]
BRADO0345
Enzymes [BR:
bra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BRADO0345
DNA replication proteins [BR:
bra03032
]
Prokaryotic type
DNA Topoisomerases
BRADO0345
DNA repair and recombination proteins [BR:
bra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BRADO0345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
HTH_24
ParE_toxin
Motif
Other DBs
NCBI-ProteinID:
CAL74300
UniProt:
A4YK74
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All DBs
Position
359749..360936
Genome browser
AA seq
395 aa
AA seq
DB search
MMDQQNFESPRVGPADAEVALAKALGQWPPKPGRRKLTLKDLAHAKTAHAQANAKTTVEE
LAKRIGLKLGDQSELTIRRIKRGKSYSFIRANGTQIRHAGTIRRLHAMAVPPAYREVRYA
PDPSLHLQAVGIDAAGRLQYRYHADWEKVREHRKAHRLAKLVGALPRIRRAVSKHLAGDA
PTREFALAAVIELIARTAIRPGSESYARLNGTRGAATLLKSNVLLEDDCLVLTFKAKGGK
AVRKECDAAKLVRAVGVLRGLPGRRMFQYRDAQGVVRAVSTTQVNAFLREIAGIKISAKD
FRTLMASAVALETLSRITPAESARGRKKQILEAIRAAADELTNTPAICRKSYVHDTIVTA
FEDGILERFAATMKGQRSQTKREQLLAQVVTAVSA
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgatggaccagcagaatttcgagagtcccagggtcggcccggccgacgccgaggtggcg
ctcgcgaaggcgctgggccagtggccgcccaagccggggcgccgcaagctgacgctgaag
gacttggcgcatgccaaaaccgcccatgcgcaggccaatgccaagaccacggtcgaggaa
ctggccaagcggatcggattgaagctgggcgaccagtcggagctgacgatccgccgcatc
aagcgcggcaaaagctacagcttcatccgcgccaacggcacccagatccgccacgccggc
accatccgccgcctgcacgcgatggcggtgccgccggcctatcgcgaggtgcgttacgca
cccgatccgagcctgcatctccaggcggtcggcatcgatgccgccggccggctgcaatat
cgctatcacgccgactgggagaaggtgcgcgagcatcgcaaggcgcatcgtctcgccaag
ctggtcggcgcgctgccgcgcatccgccgtgcggtgtccaagcatctcgccggcgacgcg
ccgacgcgcgaattcgcgctcgccgccgtgatcgagctgatcgcgcgcaccgcgatccgt
cccggcagcgagtcctatgcgcgcctcaacggcacccgcggcgccgcgacgctgctgaag
tcgaacgtgcttctggaagacgactgcctggtgctgaccttcaaggccaagggcggcaag
gcggtgcgcaaggaatgcgacgccgccaagctggtgcgtgcggtcggcgtcctgcgcggc
ctgcccggccggcgcatgttccagtatcgcgacgcccagggcgtagtgcgcgcggtgtcg
accacgcaggtgaatgcgttcctgcgcgagatcgccgggatcaagatctcggccaaggat
ttccgcacgctgatggcttcggcggtcgcgctggagacgttgtcgcggatcacgccggcg
gaaagcgcgcgcggccgcaagaagcagatcctcgaggcgatccgtgccgcggccgacgag
ctcaccaacacgccggcgatctgccgcaagagctacgtgcacgacaccatcgtgacggcg
ttcgaggacggcattctcgagcgcttcgccgccaccatgaagggccagcgctcgcagacg
aaacgcgagcaactgctggcgcaggtggtgacggccgtgtcggcctga
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