Bradyrhizobium sp. ORS 278: BRADO0401
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Entry
BRADO0401 CDS
T00516
Name
(GenBank) putative 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bra
Bradyrhizobium sp. ORS 278
Brite
KEGG Orthology (KO) [BR:
bra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bra03016
]
BRADO0401
Enzymes [BR:
bra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BRADO0401
Transfer RNA biogenesis [BR:
bra03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BRADO0401
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
CAL74349
UniProt:
A4YKC3
LinkDB
All DBs
Position
407568..408107
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AA seq
179 aa
AA seq
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MPRLFTGLEIPAEVGQTLSTLRGGLPGARWIDPENYHVTLRFIGDIDGASANEIAAMLWR
VNRKPFEVTVQGLSSFGGRKPRAVVANIAPSRPLIELQAELERMMQRIGLDPEGRKFVPH
VTLARLHDASSQDVADYLSVRGYFPSRVFMAERFVLFSSRASTGGGPYVVEDAYDLCAA
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtctgtttactggactggagatcccggccgaggtcggccagaccctctccact
ctgcggggtggccttcccggcgcccgctggatcgatcctgaaaattatcacgtcaccttg
cgcttcatcggcgacatcgacggcgcgtccgccaacgagatcgcggcgatgctgtggcgg
gtcaaccgcaagccgttcgaggtcacggtgcagggcctctccagcttcggcggccgcaag
ccgcgggcggttgtcgccaacatcgcgcccagcaggccgctgatcgagctgcaggccgag
ctggagcggatgatgcagcggatcgggctcgatccggagggccgcaaattcgtgccccat
gtcaccctggcgcggctgcacgatgcgtcgagtcaggatgtcgccgattatctctcggtc
cgcggctacttcccgagccgggttttcatggccgagcgcttcgtgctgttttcgtcccgt
gcttccacgggaggcgggccctatgtggtggaggacgcctacgatctgtgcgccgcctga
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