Bradyrhizobium sp. ORS 278: BRADO0752
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Entry
BRADO0752 CDS
T00516
Symbol
polA
Name
(GenBank) DNA polymerase I (POL I)
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bra
Bradyrhizobium sp. ORS 278
Pathway
bra03030
DNA replication
bra03410
Base excision repair
bra03420
Nucleotide excision repair
bra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BRADO0752 (polA)
03410 Base excision repair
BRADO0752 (polA)
03420 Nucleotide excision repair
BRADO0752 (polA)
03440 Homologous recombination
BRADO0752 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bra03032
]
BRADO0752 (polA)
03400 DNA repair and recombination proteins [BR:
bra03400
]
BRADO0752 (polA)
Enzymes [BR:
bra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BRADO0752 (polA)
DNA replication proteins [BR:
bra03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BRADO0752 (polA)
DNA repair and recombination proteins [BR:
bra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BRADO0752 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BRADO0752 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
CAL74677
UniProt:
A4YLA1
LinkDB
All DBs
Position
complement(793323..796427)
Genome browser
AA seq
1034 aa
AA seq
DB search
MGGERAGICRSEGVNPGQIPYIAAMPKAPQKAAVTPAAPAPAAAKNLAKAAAKGDHVFLV
DGSSYIFRAYHALPPLNRKSDGLNVNAVLGFCNMLWKLLRDMPETDRPTHLAIVFDKSEV
TFRNQIYADYKAHRPPAPDDLIPQFALIREAVRAFDLPCLEQSGFEADDLIATYARLACE
RGATTTIVSSDKDLMQLVNDCVTMYDTMKDRRIGTAEVIEKFGVPPEKVVEVQALAGDST
DNVPGVPGIGIKTAAQLINDYGDLESLLTRAAEIKQPKRREALIENAEKARISRQLVLLD
DKVALEVPLDDLAVHEPDPRKLIAFLKAMEFSTLTRRVAEYSQIDPADVTADAQLKVGSS
PAAAPTPSSPASGGGSAPSKPATAPRTGDPRIDKSAMGKGTPAGLAESRAEAAKSARIDR
DKYQTLRSLPELKAFLARAHEFGRVTVDVKASSIDPMQANLCGLSLALAPGEACYIPLAH
RQAGDGGGLFDAGLAPDQIKESEALAALKPVLESTGLLKIGYNIKFLAVLLAQHGITLQN
VDDILLMSYALDAGRGSHKLDSLAEHVLAHAIISEGELIGSGKNKLTFEQVAIDRATAHA
AEAADVIHRVWRVLKPRLTAERMTAVYETLERPLVSVLARMERRGISIDRQVLSRLSGDF
AQTAARVEAELQELAGEPINVGSPKQIGDILFGKMGLSGGTRTKTGAWSTSASILDDLAE
QGNDFARKILEWRQVSKLKSTYTDALPTYVNPQTHRVHTTYALAATTTGRLSSNEPNLQN
IPVRTEDGRKIRRAFIATPGYKLVSADYSQIELRLLAEIADIPVLKQAFKDGLDIHAMTA
SEMFGVPIKDMPSEVRRRAKAINFGIIYGISAFGLANQLGIAREEASAYIKRYFERFPGI
RAYMDETREFCRKNGYVVTLFGRKCHYPEIKASNASVRAFNERAAINARLQGTAADIIRR
AMTRVEEALAQKKLSAQMLLQVHDELIFEVPEDEVAATLPVVQHVMQDAPFPAVLLSVPL
HVDARAADNWDEAH
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
ttgggtggggaacgcgccggaatctgccgttccgagggtgtcaatcccggccaaattccc
tacattgcggccatgcccaaagctccccagaaagccgccgtcacgcccgccgctcctgcg
cctgccgccgccaagaatttggcaaaggccgcggccaaaggcgaccatgtgttcctggtc
gacggctcgtcctacatcttccgcgcctatcacgcgctgccgccgctgaaccgcaagtcc
gacggactgaacgtcaatgccgtgctcggcttctgcaacatgctttggaagctcttgcgc
gacatgcccgagaccgaccggccaacgcatctggcgatcgtgttcgacaagtccgaggtc
acgttccgcaaccagatctacgccgactataaggcacaccggccgccggcacccgatgat
ctgatcccgcaattcgcgctgatccgcgaggccgtgcgcgccttcgacctgccctgcctg
gaacagtccggcttcgaggccgacgacctgatcgcgacctatgcgcggctcgcttgcgag
cgcggcgccaccaccaccatcgtgtcctccgacaaggacctgatgcagctcgtcaacgac
tgcgtcacgatgtacgacaccatgaaggaccgccgcatcggcacggccgaggtgatcgag
aagttcggcgtgccgccggagaaggtcgtcgaggtgcaggcgctggccggcgactccacc
gacaacgtgccgggcgtgcccggcatcggcatcaagaccgcagcgcagctgatcaacgac
tatggcgatctcgagagcctgctgacgcgcgcggccgagatcaagcagccgaagcggcgc
gaggcgctgatcgagaatgccgagaaggcgcggatctcgcgccagctggtgctgctcgac
gacaaggtcgccctcgaggtgccgctggacgacctcgccgtgcacgagcccgatccgcgc
aagctgatcgcgtttctcaaggcgatggagttctccacgctgacgaggcgtgtggcggag
tattcgcagatcgatccggctgatgtgaccgcggacgcgcaattgaaggtgggatcgagc
ccggcggcggcccccaccccgtcctcccccgcgagcggaggagggagcgcaccgagcaag
ccggcgacggctccgcgcacgggtgatccacgcatcgacaaatccgcgatgggcaagggc
acgcctgctggtcttgccgagtccagagccgaggcagcgaagagcgcgcgcatcgatcgc
gacaaatatcagacgttgcgctcgctgccggagctgaaggcttttctcgcccgcgcgcac
gagttcggccgcgtcaccgtcgacgtcaaggcgagctcgatcgatccgatgcaggcaaac
ctgtgcggcttgtctctggcgttggcgccgggcgaggcctgctacatcccgctggcgcat
cgccaggccggcgatggcggcggcctgttcgatgccgggctcgcgccggaccagatcaag
gagagcgaggcgctggcggcgctgaagccggtgctggaatccaccgggctcttgaagatc
ggatacaacatcaagttcctggccgtgctgctggcgcagcatggcatcacgctgcaaaac
gtcgacgacatcctgctgatgagctacgcgctcgacgccgggcgcggctcgcacaagctc
gactcgctcgccgagcatgtgctggcgcatgccatcatcagcgaaggcgagttgatcggc
agcggcaagaacaagctgacgttcgagcaggtcgcgatcgaccgcgccacggcgcatgcg
gctgaagcggccgatgtcatccatcgggtctggcgcgtactgaagccgcgcctcacagcc
gagcgcatgaccgcggtttacgagacgctggaacggccgctcgtgtcggtgctggcgcgc
atggagcggcgcggcatttcgatcgaccgccaagtgctgtcgcgcctgtccggcgacttc
gcccagaccgcggcgcgtgtcgaagccgagttgcaggagctcgccggcgagccgatcaat
gtcggcagccccaagcagatcggcgacatcctgttcggcaagatgggcctgtccggcggc
accaggaccaagaccggcgcctggtcgacctccgcctcgattctcgacgacctcgccgag
cagggcaatgatttcgcgcgcaagatcctggaatggcgccaggtctcgaagctgaaatcg
acctacaccgatgcgctgccgacctacgtcaacccgcagacacatcgcgtgcacacgacc
tacgcactggcggcgaccaccacgggccggctgtcgtcgaacgagccgaatctgcagaac
atcccggtgcgcaccgaggacggccgcaagatccgccgcgccttcatcgcgacgcccggc
tacaagctggtgtcggcggactattcgcagatcgagctgcggctgctggccgagatcgcc
gacatcccggtgctgaagcaggcgttcaaggacgggctcgacattcacgcgatgacggcg
tcggagatgttcggcgtgccgatcaaggacatgccgagcgaggtgcgtcgtcgcgccaag
gcgatcaatttcggcatcatctacggcatctccgccttcggcctcgccaaccagctcggc
atcgcccgcgaggaggcctcggcctatatcaagcgctatttcgagcgcttcccgggcatc
cgcgcctacatggacgagacccgcgagttctgtcgcaagaacggctatgtcgtcaccctg
ttcggccgcaagtgccattaccccgaaatcaaggcctcgaacgcctcggtccgcgccttc
aacgagcgcgccgcgatcaacgcgcggctgcaggggacggcggccgacatcatccggcgc
gcgatgacgcgcgtcgaggaggcgctggcgcaaaagaagctctcggctcagatgctgctg
caggtgcatgacgaactgatcttcgaggtccctgaggacgaggtcgccgcgaccttgccg
gtcgtgcagcacgtcatgcaggacgcccccttcccggccgtgctgctgtccgtcccgctg
cacgtcgacgcgcgcgcagcggataattgggacgaggcgcattga
DBGET
integrated database retrieval system
