Bradyrhizobium sp. ORS 278: BRADO1125
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Entry
BRADO1125 CDS
T00516
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bra
Bradyrhizobium sp. ORS 278
Pathway
bra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BRADO1125 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bra03019
]
BRADO1125 (recQ)
03400 DNA repair and recombination proteins [BR:
bra03400
]
BRADO1125 (recQ)
Enzymes [BR:
bra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BRADO1125 (recQ)
Messenger RNA biogenesis [BR:
bra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BRADO1125 (recQ)
DNA repair and recombination proteins [BR:
bra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BRADO1125 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
ResIII
Fic-like_C
Hydant_A_N
Motif
Other DBs
NCBI-ProteinID:
CAL75036
UniProt:
A4YMB0
LinkDB
All DBs
Position
complement(1199823..1201697)
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AA seq
624 aa
AA seq
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MAPSSTAPTDTADRALAVLHSVFGLPGFRGAQEKVVRHVAEGGNCLVLMPTGGGKSLCYQ
LPALLRKGCGIVVSPLIALMRDQVAGLIEAGVNAAVLNSTLSREEADEVERRLIVGDLDL
LYVAPERLVTPRCLSLLERAEIALFAIDEAHCVSQWGHDFRPEYIGLSIIAERFPDVPRI
ALTATADELTRKEIAERLSLSDAPQFVASFDRPNIRYEIVDKNNGPAQLKAFIKERHPGD
AGVVYCLSRAKVEDTAAALNEAGITAIPYHAGLDPAVRSRNQDRFINEDGVVVVATVAFG
MGIDKPDVRFVAHLDLPKSIEAYYQETGRAGRDGKASTAWMAYGLSDIVQQRRMIDESTG
AEAYKRMSIRKLDALVALAETAGCRRKLLLSYFGESPAGENCGNCDNCVSPPKMRDGKVI
AQKLLSCAYRTGQRFGAMHLIDVLVGRATERVKQFGHDQLSVFGIGREMNEKQWRAALRQ
LVAMGYLAPDSEAYGALKLTETSRGVLKGETPVMLREETASTRAIRSKSRRGELVARPAA
AADAPLLASLRAWRSEIARKRGVPAYVVLHDATIDGIASARPTTLGQLRDIPGIGDKKLE
HYGEELLALINAARSAGAGSPPDS
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggccccatcctccaccgccccgaccgacacggccgatcgcgcgctggcggtgctgcat
tcggtattcgggctgccgggctttcgcggcgcgcaagagaaggtggtccggcatgtcgcc
gagggcggcaactgcctggtgctgatgccgaccggcggcggcaagtcgctgtgctatcag
ctgccggctttgctgcgcaaaggctgcggcatcgtggtgtcgccgctgatcgcgctgatg
cgcgaccaggtcgccggcctgatcgaggccggcgtcaatgcggcggtgctgaactccaca
ctgtcgcgcgaggaggccgacgaggtcgagcggcggctcatcgtcggcgatctcgacctg
ctctatgtcgcccccgagcggctggtgacgccgcgctgcctgtcgctgctggagcgcgcc
gagatcgcgctgttcgcgatcgacgaggcgcattgcgtatcgcaatgggggcacgacttc
cgcccggaatatatcggcctctcgatcatcgccgagcgcttcccggacgtgccgcggatc
gcgctgacggcgaccgccgacgagctgacgcgcaaggaaatcgccgagcggctcagcctg
agcgacgcgccgcaattcgtcgccagcttcgaccgtcccaacatccgctacgagattgtc
gacaagaacaacggccccgcgcagctgaaggccttcatcaaggagcgccatcccggggac
gccggtgtcgtctactgcctgtcgcgcgccaaggtcgaggacaccgcggcggcgctgaac
gaggccggcatcaccgcgatcccctatcacgccgggctcgatccggcggtgcgctcgcgc
aaccaggaccgcttcatcaacgaggacggcgtcgtcgtcgtggccaccgtcgccttcggc
atgggtatcgacaagccggacgtgcgcttcgtcgcgcatctcgacctaccgaagagcatc
gaggcctactaccaggagacgggccgcgccgggcgcgacggcaaggcctcgaccgcctgg
atggcctatggcctctcggacatcgtgcagcagcgccgcatgatcgacgagtccaccggc
gccgaggcgtacaagcggatgtcgatccgcaagctcgacgcgctggtcgcgctcgcggag
accgccggctgccggcgcaagctgctgctgagctatttcggcgagagcccggcgggcgag
aactgcggcaattgtgacaactgcgtgtcgccgccgaagatgcgcgacggcaaggtgatc
gcgcagaagctgctgtcctgtgcctatcgcaccggccagcgtttcggcgccatgcacctg
atcgacgtgctggtcgggcgcgccaccgagcgtgtcaagcagttcggacatgatcaattg
tcagtgttcggcatcggccgcgagatgaatgagaagcagtggcgcgccgcgctgcgccag
cttgtggccatgggctacctggcgcccgacagcgaggcctatggcgcgctgaagctgacg
gagacgtcgcgcggcgtgctcaagggcgaaacgccggtgatgctgcgcgaggagaccgcc
agcacccgcgccatccgcagcaaatcgcggcgcggcgagctggtggcgcggccggccgcg
gctgccgatgcgcccttgctcgcgagcctcagggcatggcgttcggagatcgcgcgcaag
cgtggtgtaccagcctatgtcgtgctgcacgacgccaccattgacggcatcgccagtgcc
cgcccgacgacgctcggccagctgcgcgatataccagggatcggcgacaagaagctcgag
cattatggcgaggagctgcttgcgctgatcaacgccgcgcggtcggcaggagcaggatcg
ccgccagacagttga
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