Bradyrhizobium sp. ORS 278: BRADO1372
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Entry
BRADO1372 CDS
T00516
Symbol
rluD
Name
(GenBank) pseudouridine synthase (pseudouridines 1911, 1915, 1917 in 23S RNA)
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
bra
Bradyrhizobium sp. ORS 278
Brite
KEGG Orthology (KO) [BR:
bra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bra03009
]
BRADO1372 (rluD)
Enzymes [BR:
bra01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
BRADO1372 (rluD)
Ribosome biogenesis [BR:
bra03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BRADO1372 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CAL75267
RhizoBase:
BRADO1372
UniProt:
A4YMZ1
LinkDB
All DBs
Position
complement(1457253..1458407)
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AA seq
384 aa
AA seq
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MATRRTAIATEVVTPAIIIMRRSRAISWACSGEDGSGATVVFMDISTSQSHGLMTIIVAG
DEGSPRLDRVLAARLPELSRSRLKALILAGQVSLTSDSFGSGAVRDPAYHVTTGDTITID
VPEAVAPEPQAEAIPLQIIYEDDDIIVIDKPSGLVVHPAAGHETGTLVNALIAHCGASLS
GIGGVKRPGIVHRLDKDTTGLMVVAKNDMAHASLSAQFADHGRTGAMERGYLAFAWGVPH
RPHGTINAAIDRHPHARDKMAVRAKGREAITHYEVQESFTGRDGKPVASLIACHLETGRT
HQIRVHLAHLGHPLLGDAVYGPHFKTKANQLSERARAALDSLGRQALHAYLLVIEHPRTG
DIMRWESELPEDLSLLGEALRAAL
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaggagaaccgcgatcgcgaccgaggtggtcacgcccgcgatcatcatcatg
cgccgcagccgcgccatcagctgggcctgctcgggcgaggacggctcgggcgcaacggta
gtattcatggacatctcgacttcacaatcccacggtctgatgacgatcattgtcgccggc
gacgaaggctcgccgcggctcgatcgcgtgctggcggcgcggctgccggagctgtcgcgg
tcgcggctgaaggcgctgatcctggccggacaggtgagcctgacttcagacagctttggt
tcgggcgccgtgcgcgaccccgcttatcacgtcacaaccggcgacacgatcacaatcgac
gtgccggaggccgtcgcgcccgagccgcaggccgaggcgatcccgcttcagatcatctac
gaggacgacgatatcatcgtcatcgacaagccctcaggcctcgtggtgcatcccgccgcc
gggcacgagaccgggacgctggtcaacgcgctgatcgcgcattgcggcgccagtctgtcg
gggatcggcggggtgaagcggccgggcatcgtgcaccggctcgacaaggacaccaccggg
ctaatggtggtcgccaagaacgatatggcgcacgcctccttgagcgcgcagttcgccgat
cacggccgcaccggcgcgatggagcgcggctatctggcgttcgcctggggggtgccgcac
cggccgcacggcaccatcaacgccgccatcgaccgccatccgcacgcccgcgacaagatg
gcggtgcgggcgaagggccgcgaggccatcacgcattacgaggtgcaggagagttttacc
ggccgcgacggcaagccggtggcctcgctgatcgcctgccatctcgagaccgggcgcacc
caccagatccgggtgcatctcgcccatctcgggcatccgctgctgggcgatgccgtctat
ggcccgcatttcaagaccaaggcgaaccagctgtccgagcgggcgcgggcagcgctcgac
tcactcggacgacaggcgctgcatgcctatttgttggtaattgagcacccgcggacggga
gacatcatgcgctgggaatcggagcttccggaggatctttctcttttgggagaggcgctg
cgagcggcgctatga
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