Bradyrhizobium sp. ORS 278: BRADO3828
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Entry
BRADO3828 CDS
T00516
Name
(GenBank) putative DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bra
Bradyrhizobium sp. ORS 278
Pathway
bra03030
DNA replication
bra03430
Mismatch repair
bra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BRADO3828
03430 Mismatch repair
BRADO3828
03440 Homologous recombination
BRADO3828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bra03032
]
BRADO3828
03400 DNA repair and recombination proteins [BR:
bra03400
]
BRADO3828
Enzymes [BR:
bra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BRADO3828
DNA replication proteins [BR:
bra03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BRADO3828
DNA repair and recombination proteins [BR:
bra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BRADO3828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA_5
AAA_16
AAA
AAA_24
Mg_chelatase
NACHT
FIST_C
DnaB_C
Motif
Other DBs
NCBI-ProteinID:
CAL77593
LinkDB
All DBs
Position
3998306..3999346
Genome browser
AA seq
346 aa
AA seq
DB search
MSARKVEPEIAVRHPRETTALFGHCEAEAALLSAYRSGRMAHAWLIGGPQGIGKATLAYR
MARFVLTHRDPRAAEVLAAESLHVDADDHVTRLIASEAHGGLLTLERSANDKGVLRTVIT
VDETRETISFFGSTAAVEGWRICIVDTVDELNPNAANALLKILEEPPQQSLFLLVSHAPA
RVLATIKSRCRRLSLRALSTEDVISAAAEAIGMDGGEPALREAAKASEGSVSRTLMLMGG
DGLQLQTRTAALLASLPRIDAGELHALGDALGTSDRVALASFLDSIERWVAERLRAGDPN
AELPRLARLAEVWEKIVRAARDTESYNLERKPLVFSVFGMLAEATR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcgcaaggtcgagcctgagattgcggtccggcatccgcgcgagaccacggcg
ctgttcgggcattgcgaggcggaggcggcgctgctgtcggcctaccgcagcggacggatg
gcgcatgcctggctgatcggtgggccccagggcatcggcaaggcgaccttggcctatcgc
atggcgcgcttcgtgctgacgcaccgcgatcccagggctgcggaggtgcttgccgccgaa
tcgctccatgtcgatgcggacgatcacgtcacccggctgatcgcctcggaagcgcatggc
gggctgctgaccctggagcggtcggcgaacgacaagggcgtgctgcgcaccgtcatcacg
gtcgacgagacgcgcgagacgatctcgttcttcggctcgacggcagcggtcgagggctgg
cgcatctgcatcgtcgacaccgtcgacgagctcaatcccaacgcagcgaacgcgctattg
aagatcctcgaagagccgccgcagcaatcgctgttcctgctcgtcagccacgcgccggcg
cgggtgctcgccaccatcaaatcgcgctgccgccggctgtcgttgcgagccttgtcgacc
gaggacgtcatcagcgccgcggccgaggccatcggcatggatggcggcgagccggcgctg
cgcgaggccgccaaggcctccgagggcagcgtctccaggaccctgatgctgatgggcggc
gacgggctgcaactgcagacccgcacggcagcgctgctcgcgagcctgccgcgaatcgac
gccggcgagctgcatgccctgggcgacgcgctcggcaccagcgaccgggtcgcgctggcc
agcttcctcgacagcatcgaacgctgggtggcggaacggctgcgggcaggggatcccaac
gcggaactgccgcgccttgcacggctggcggaggtatgggaaaagatcgtccgcgccgcg
cgcgacaccgaatcctataatctggagcgaaaaccgctggttttctcggtgttcgggatg
ctcgccgaagccacgcggtaa
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