Bradyrhizobium sp. ORS 278: BRADO4083
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Entry
BRADO4083 CDS
T00516
Symbol
lpD
Name
(GenBank) Dihydrolipoyl dehydrogenase (E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes) (Dihydrolipoamide dehydrogenase)
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
bra
Bradyrhizobium sp. ORS 278
Pathway
bra00010
Glycolysis / Gluconeogenesis
bra00020
Citrate cycle (TCA cycle)
bra00260
Glycine, serine and threonine metabolism
bra00280
Valine, leucine and isoleucine degradation
bra00310
Lysine degradation
bra00380
Tryptophan metabolism
bra00620
Pyruvate metabolism
bra00630
Glyoxylate and dicarboxylate metabolism
bra00640
Propanoate metabolism
bra00670
One carbon pool by folate
bra00785
Lipoic acid metabolism
bra01100
Metabolic pathways
bra01110
Biosynthesis of secondary metabolites
bra01120
Microbial metabolism in diverse environments
bra01200
Carbon metabolism
bra01210
2-Oxocarboxylic acid metabolism
bra01240
Biosynthesis of cofactors
Module
bra_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bra_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bra_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
bra_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
bra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
BRADO4083 (lpD)
00020 Citrate cycle (TCA cycle)
BRADO4083 (lpD)
00620 Pyruvate metabolism
BRADO4083 (lpD)
00630 Glyoxylate and dicarboxylate metabolism
BRADO4083 (lpD)
00640 Propanoate metabolism
BRADO4083 (lpD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BRADO4083 (lpD)
00280 Valine, leucine and isoleucine degradation
BRADO4083 (lpD)
00310 Lysine degradation
BRADO4083 (lpD)
00380 Tryptophan metabolism
BRADO4083 (lpD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
BRADO4083 (lpD)
00670 One carbon pool by folate
BRADO4083 (lpD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bra04147
]
BRADO4083 (lpD)
Enzymes [BR:
bra01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
BRADO4083 (lpD)
Exosome [BR:
bra04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
BRADO4083 (lpD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
NAD_binding_8
GIDA
FAD_oxidored
DAO
HI0933_like
FAD_binding_3
Lys_Orn_oxgnase
Thi4
2-Hacid_dh_C
AlaDh_PNT_C
Amino_oxidase
3HCDH_N
GMC_oxred_N
PT-TG
Motif
Other DBs
NCBI-ProteinID:
CAL77835
UniProt:
A4YVA9
LinkDB
All DBs
Position
complement(4272523..4273944)
Genome browser
AA seq
473 aa
AA seq
DB search
MADTSFDVIIIGSGPGGYVTAIRAAQLGFKTAIIEKTHLGGICLNWGCIPTKALLRSAEI
YHYMQHAKDYGLSAEKISYDPKAVVQRSRGVSKRLADGVGFLMKKNKVQVIWGRANIDAP
GKISVTKADVEAPKGALGEGSYQAKHIIVATGARPRVLPGLEPDKKLVWTYFEAMVPDRM
PKSLLVVGSGAIGIEFASFFRTMGSEVTVVEVLPQILPVEDAEIAGIARKQLEKQGLKIM
TGAKVTKLDKKSDSVVATIDDGKGKIETTEFDRVISAVGVVGNIENLGLEKLGVKTDRGC
IVIDGYGKTNVPGLYAIGDVAGPPMLAHKAEHEGVVCIEAIKGLHPHPMDKSLIPGCTYC
HPQVASVGLTEAKAKEQGRDIRVGRFPFVGNGKAIALGEDQGLVKVIFDKKTGQLIGAHM
VGAEVTELIQGYVVAMNLETTEEELMHTIFPHPTLSEMMKEAVLDAYGRVLNM
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacatccttcgacgtcatcatcatcggctcgggcccgggcggctacgtcacc
gcgatccgcgccgcccagctcggcttcaagaccgcgatcatcgagaagacgcatctcggc
ggcatctgcctgaactggggctgcatcccgaccaaggcgctcctacgctcggccgagatc
tatcactacatgcagcatgccaaggactacggtctctctgctgagaagatctcctacgat
ccgaaggcggtggtgcagcgctcgcgcggcgtgtccaagcggcttgccgatggcgtcggc
ttcctcatgaagaagaacaaggtgcaggtgatctggggccgcgccaacatcgatgcgcca
ggcaagatctccgtgaccaaggccgacgtcgaggcgccgaagggcgcgctgggcgagggg
agctaccaggccaagcacatcatcgtcgcgaccggcgcgcggccgcgcgtgctgccgggc
ctggagccggacaagaagctggtctggacctatttcgaggcgatggtgccggacaggatg
ccgaagtcgctgctcgtcgtcggctccggcgcgatcggcatcgagttcgcctcgttcttc
cgcaccatggggtcggaggtgacggtggtcgaggtgctgccgcagatcctgcccgtcgag
gacgccgagatcgccggcattgcccgcaagcagctggaaaagcagggcctcaagatcatg
accggcgccaaggtcaccaagctcgacaagaagagcgacagcgtggtggcgacgatcgac
gacggcaagggcaagatcgagacgaccgagttcgaccgcgtgatctccgcggtcggcgtg
gtcggcaacatcgagaatctcgggctcgagaagctcggggtgaagaccgaccgcggctgc
atcgtgatcgacggctacggcaagaccaacgtgcccggcctctacgcgatcggcgacgtc
gcgggaccgccgatgctcgcgcacaaggccgagcatgagggcgtggtctgcatcgaggcg
atcaagggcctgcatccgcatccgatggacaagagcctgatcccgggctgcacctattgc
cacccgcaggtcgcctccgtcggcctcaccgaagccaaggcgaaggagcaggggcgagac
atccgcgtcggccgcttccccttcgtcggcaacggcaaggcgatcgcgctcggcgaggac
cagggcctggtcaaggtgatcttcgacaagaagaccggccagctgatcggcgcgcacatg
gtcggcgccgaagtcaccgaattgatccagggctatgtcgtcgcgatgaacctcgagacg
accgaggaagagctgatgcacaccatcttcccgcatccgacgctgtcggagatgatgaag
gaagccgtgctcgacgcctatgggcgtgtgctgaacatgtag
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