Bradyrhizobium sp. ORS 278: BRADO4355
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Entry
BRADO4355 CDS
T00516
Name
(GenBank) putative sigma-54-dependent transcriptional regulator, HTH Fis-type family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
bra
Bradyrhizobium sp. ORS 278
Brite
KEGG Orthology (KO) [BR:
bra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bra03000
]
BRADO4355
Transcription factors [BR:
bra03000
]
Prokaryotic type
Helix-turn-helix
Other families
BRADO4355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_lid_14
HTH_8
HTH_23
HTH_30
HTH_7
HTH_28
PAS_4
AAA_5
HTH_29
PAS_8
HTH_22
AAA_2
PAS
AAA_16
PAS_7
Sigma70_r4
HTH_17
PAS_9
HTH_Tnp_1
NUMOD1
HTH_38
Motif
Other DBs
NCBI-ProteinID:
CAL78101
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Position
4545051..4546952
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AA seq
633 aa
AA seq
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MTMLPGSRRLDGAWLKLDDQDQPPGGQMSADIYDSWMRCITMGLDALRPPSPEFVDAAVL
RQEQQRCSLVRGLALAEMHTLHQQIAGSNFMIAFATAEGLLLDIISDSSFSDASDAACIR
AGSLWTESICGTNGLGTAAFLKRPIVVHGREHFFARYNNLTCVAAPIFGPDGEVAGILDA
SSDCMSRQAHTQALVAMAATQIENGLFREQHRGDILIAFHNRGEYLHTLSAGLLAVDNDG
RILAANRAARVLLHGLPAFAGRPFGDVFRGRFSDFVDEGRRMERQRLEDDVGSQFVATIE
NSRQFPMTHRVVSPRPTPLKSPAAPFVSADQRIAAIVQRVAVAATRKMPILIRGETGTGK
EQMARHAHAASRRSGAFVAVNCAALPDSLVEAELFGYTEGAFTGARKGGSAGLFKEADGG
TLFLDEIGDMPVTLQAVLLRFLDDWTVRPVGGSTREVDVLLVSATNANLDDAIAKGRFRS
DLLFRLNTLEVTLLPLRERNDFADIARHLMHKIDPSIALSEAAIQRLAQRSWDGNIRELR
NALARLSLSETGLVIDAATVDAVIGADRPEGMAAKITVDRAAVEDGAPADLHEIQRALVL
STYADTGNNISKTARRLGISRNTVYRALRGKPE
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgctgccaggcagccgacgcctcgatggcgcatggttgaagctggacgatcag
gatcagccgccaggcggtcagatgtcggccgacatctacgacagctggatgcgctgcatc
acgatgggtctcgatgcgctgcgcccaccctcgcctgaattcgtcgatgccgccgtgctg
cggcaggagcagcagcgctgctcgctggtgcgcggcctcgctctggcggagatgcacacg
ctgcatcagcagatcgccggctcgaacttcatgatcgcgtttgcaaccgccgaagggctg
ctgctcgacatcatctccgactcgagcttcagcgacgcctcggatgccgcctgtatccgc
gccggctcgctctggaccgaaagcatctgcggcaccaacgggctcggaacggcggccttt
ctcaagcggccgatcgtcgtgcatggacgcgagcacttcttcgcccgctacaacaatctg
acctgcgtggcggcgccgatctttgggcccgacggcgaggtcgccggcatcctcgacgca
tcgtccgactgcatgtcgcggcaggcgcacacccaggcgctggtcgcgatggccgccact
cagatcgagaacgggctgttccgcgagcagcatcgcggcgacatcctgatcgcctttcac
aaccgcggcgaatatctgcatacgttgagtgccggcctgctcgccgtcgacaatgacggc
cgcattctcgccgccaaccgcgccgcgcgcgtgctgctgcatggactgcccgccttcgcc
ggccgcccgttcggcgatgtcttccggggccggttcagcgacttcgtcgacgagggccgg
cgcatggagcggcagcggctcgaggacgacgtcggcagccagttcgttgccacgatcgag
aacagccgccagtttccgatgacgcatcgggtggtgtcgccgcgaccgacaccgctgaag
agccccgcggcgccgttcgtctcggccgatcagcggatcgcggccatcgtgcagcgggtc
gctgtcgctgccacacgcaagatgccgatcctcatccgtggcgagaccggcaccggcaag
gagcagatggcgcgacacgcgcatgccgcgagccggcgcagtggcgcgttcgtcgcggtc
aattgcgcggccctccccgacagcctggtcgaggccgagctgttcggctatacagagggc
gcgttcaccggcgcccgcaagggcggctcggccggcctgttcaaggaagccgatggcggc
acgctgttcctcgacgagatcggcgacatgccggtgaccctgcaggcggtgctgctgcgc
ttcctcgacgactggaccgttcggccggtcggcggcagcacgcgtgaagtcgatgtgctc
ctggtctcggccaccaacgccaatctcgacgacgccatcgcgaagggccggttcagatcc
gatctgctgtttcgcctcaacacgctcgaggtcacgctgctgccgctgcgcgaacgcaac
gacttcgccgacatcgcgcgccatctgatgcacaagatcgatccgtcgatcgcgctgtcc
gaagctgcgattcaacggctggcgcaacggagctgggacggcaacatccgcgagctccgc
aacgcgctggcccggctctcgctcagcgagaccggcctagtgatcgacgccgccaccgtc
gatgccgtcatcggggccgatcgccctgagggaatggcggcgaagatcaccgtggacaga
gctgccgtggaggacggcgctccagccgacctgcacgagatccagcgcgcgctcgtgctc
agcacctatgccgacaccggcaacaacatcagcaagaccgcgcggcggctcggcatctcg
cgcaacaccgtctatcgcgcgctgcgcggcaagccggagtaa
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