Bradyrhizobium sp. ORS 278: BRADO4398
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Entry
BRADO4398 CDS
T00516
Name
(GenBank) hypothetical protein; putative DNA-directed DNA polymerase
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bra
Bradyrhizobium sp. ORS 278
Pathway
bra03030
DNA replication
bra03430
Mismatch repair
bra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BRADO4398
03430 Mismatch repair
BRADO4398
03440 Homologous recombination
BRADO4398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bra03032
]
BRADO4398
03400 DNA repair and recombination proteins [BR:
bra03400
]
BRADO4398
Enzymes [BR:
bra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BRADO4398
DNA replication proteins [BR:
bra03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BRADO4398
DNA repair and recombination proteins [BR:
bra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BRADO4398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
FAN1_HTH
VRR_NUC
Rv2179c-like
TPR_10
Motif
Other DBs
NCBI-ProteinID:
CAL78141
UniProt:
A4YW65
LinkDB
All DBs
Position
4596533..4598746
Genome browser
AA seq
737 aa
AA seq
DB search
MPGDRRRPRPQEIGAYHMKPTTLPVYYYLDHFVEMLEFVERTYDEILSDEDRAFTSSFRG
LSKDAQCLLIRMVNRRGTIFNRALFKYPEITDLESAARNLIACGYARGLRADDYSAFLLC
QPKTALLDGARAAGFGRDIRASWSKPALADFFLATIPFDVAAMHCGAVGFIALDNTRSID
FLLYLYFGKTADSLKNFALRDLGVLRTNKETSFSSRFVDADEAHACFHYSQVLNRIEARS
VDIYQLAVKAILDGPPRTSDYAADLASRAACQVGQYFEKQGELDVAERLYRFGQSADCRE
RLVRLLYTRGEKDAAELLLREMIDDPESDDEHLFAMDFYARKFGKQRTGLSTALLRSGRL
IVVDDTHRGHPEAGVAGVLRRRGGDVYFAENTLWLTLFGLLFWDELFESGQLNSLFDWVP
HCLRDRTFHRRFAAQIDAKLAQIKSGQGLPIILRVVASKWGRSNGLFAWEHVQIDALRAL
LACANADGLAAILRAMCEDFCGMRDGFPDLMQVRDGKVTFVEVKAEGDAIRRNQLTRLRQ
LEQAGIPAEIGRVDYRFDPEQDYVVVDIETTGSWSSGDRITEIGAVKVRNHQLVEQWHSL
INPQRPIPAKIVELTGITNQMVRDAPVFHEIADSFMAFMGDGIFVAHNVNFDYGFLSSEF
ERLERRFRFPKLCTCVGMRRRYPGHTSYGLGKLCAIYGIELDDHHRALCDARAAAHLLNL
INTKRVEEAEADAVQAA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgccgggggaccgtcgtcgaccgaggccgcaggaaatcggcgcgtatcacatgaagccc
accacgttgccggtctactattatctcgaccacttcgtcgaaatgctggagttcgtggag
aggacatatgacgagatcctcagcgacgaggaccgtgcattcacctcaagctttcgcggt
ctttccaaagacgcgcagtgcctcttgatccgcatggtcaaccgacgtgggacgatcttc
aaccgcgcgctcttcaagtacccggagattacggacctcgagtccgccgctcgaaacctg
atcgcttgcggatatgcccgtggtcttcgtgccgacgattattccgctttcctgctctgc
caaccgaagaccgctcttctcgacggcgcccgggcggcgggattcggccgcgatatacgc
gcgtcctggtcgaagccggcactggccgactttttcctggcaacaattcccttcgatgtt
gccgcgatgcattgcggcgccgtgggcttcatagccctcgacaacacgcggtccatcgac
tttctgctgtatctctatttcggcaagacggcggacagtctcaagaacttcgctctgcga
gatctcggcgtgctgcgcacgaacaaggagacgtcgttcagctctcgctttgtcgacgcc
gacgaggcgcatgcctgttttcactacagccaggtgctgaaccgaatcgaagctcgttcc
gtcgatatctatcagttggcggttaaggcgatcctcgacggtccgccgcggacgagcgac
tacgccgccgatctcgcgtctcgcgccgcgtgtcaggtcggacagtatttcgagaaacag
ggcgaactggatgttgccgagcgcctctatcgtttcggccagtcggcggactgccgcgag
cgcctcgtccggctgctgtacacccgaggcgagaaggacgccgccgagcttctgttgcgg
gagatgatcgacgatcccgaaagcgacgatgagcacctcttcgccatggacttctacgcc
cgcaagttcggcaagcaacggacgggcctcagcactgcgttgctgcgatccgggcgcttg
atcgtcgtcgacgatacgcaccgcggtcatccggaagcaggcgtcgccggcgtactgaga
cgtcggggcggcgacgtctatttcgccgagaatacgctgtggctcacgctgttcgggcta
ctgttctgggatgagcttttcgaatccggccagctcaacagcctgttcgactgggttccg
cattgccttcgcgaccggacttttcatcggcgtttcgccgcgcagatcgatgcgaagctc
gcgcagatcaaatccggacagggactgcccatcatcctgcgtgtggtcgcctccaaatgg
ggccggtccaacggactgttcgcttgggagcacgtgcagatcgacgcgctacgcgccttg
ctcgcctgtgccaatgcggacggcttggctgcgattcttcgggcgatgtgcgaggacttc
tgcggcatgcgggacggcttccccgacctgatgcaggtgcgcgacggaaaagtgacgttc
gtcgaggtcaaggccgagggcgacgccatacgccgcaatcagttgacgcgtctgcgtcag
ctggagcaggccggcataccggccgagatcggccgcgtggattaccgcttcgacccggag
caagactacgtcgtcgtcgacatcgagaccacgggctcctggtcatcgggtgatcgcatc
accgaaatcggagcggtgaaggtccgcaatcatcaactggtcgagcagtggcactcgctg
atcaacccgcagcggccgatccccgcgaagatcgtcgaactaaccggcatcaccaaccag
atggttcgggatgcgcccgtttttcacgagatcgccgacagtttcatggcgttcatgggg
gacggcatcttcgtggcccacaatgtgaatttcgattacggattcttgtcgagcgagttc
gagcggctcgaacggcgcttccgcttcccgaagctgtgcacctgcgtcggaatgcggcgc
cgatatcccgggcacacatcatatgggctgggaaagctgtgcgcgatctacggcatcgag
ctggacgaccaccatcgagcgctctgcgacgctcgggcggcagcccacctgctgaatctc
atcaacacgaagcgcgtcgaagaggcggaggctgacgcggttcaggcggcgtag
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