Bradyrhizobium sp. ORS 278: BRADO5719
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Entry
BRADO5719 CDS
T00516
Name
(GenBank) putative G/U mismatch-specific DNA glycosylase (mug-like)
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
bra
Bradyrhizobium sp. ORS 278
Pathway
bra03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BRADO5719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bra03400
]
BRADO5719
Enzymes [BR:
bra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
BRADO5719
DNA repair and recombination proteins [BR:
bra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BRADO5719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CAL79387
RhizoBase:
BRADO5719
UniProt:
A4YZR1
LinkDB
All DBs
Position
5919526..5920065
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AA seq
179 aa
AA seq
DB search
MDRLPDQLQPGLRLVFVGTAASERSAATGHYYAHPGNRFWRTLHATGLTPRLHQPEEFPL
LLSLGIGFTDLCKQGAGMDHVALKAGVDVAGFAAKIERYRPATIAFTSKKAASLFYGRPT
GAIALGLQPTQKDFPATFVLASPSGAASGAWTLQPWLDLAAHVERDRPHAKQPAFNDAP
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcctgcccgatcagttgcagcccggcctgcgcctcgtcttcgtcggcacggcc
gcgagcgaacggtcggctgcgaccggacactactacgcgcaccccggcaaccgcttctgg
cgcacgctgcatgcgacgggcctgacgccgcggctgcatcagccggaggagtttcctctg
ctgctgtcgctcggcatcggcttcaccgacctgtgcaagcagggcgccgggatggatcac
gtcgccctgaaggccggcgtcgatgtcgcgggcttcgcggccaagatcgaacgctatcgg
ccggcgacgatcgctttcaccagcaaaaaggccgcaagcctgttttacggccggccgacc
ggcgcgatcgcactgggcctgcagccgacgcagaaggattttccggccaccttcgtgctg
gcgtcgccgtcaggcgcggcatcgggggcgtggaccttgcagccatggctggatctggcg
gcgcatgtcgaacgcgatcgtccgcacgcgaaacagccggcgttcaacgatgcaccgtaa
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