Bradyrhizobium sp. Ash2021: NL528_02100
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Entry
NL528_02100 CDS
T11004
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
braa Bradyrhizobium sp. Ash2021
Pathway
braa00300
Lysine biosynthesis
braa00470
D-Amino acid metabolism
braa01100
Metabolic pathways
braa01110
Biosynthesis of secondary metabolites
braa01120
Microbial metabolism in diverse environments
braa01230
Biosynthesis of amino acids
Module
braa_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
braa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NL528_02100 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NL528_02100 (dapF)
Enzymes [BR:
braa01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NL528_02100 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
DUF2924
Motif
Other DBs
NCBI-ProteinID:
WMT75249
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Position
419579..420451
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AA seq
290 aa
AA seq
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MSALANHAFAKMNGIGNEIVVVDLRDKPAVVTAEEARAVASPAGVPYDQLMVLQPPRLQG
TEAFIRIYNSDGSEAGACGNGMRCVVRRLFEQTGQTAVTFETRAGLLNCWKGPAPDLYTV
DMGAPKFGWQDIPLAEEFRDTRYIELQVGPIDAPVLHSPSVVSMGNPHAIFWVDDVNAYD
LDRFGPLLENHPIFPERANITLAHIVDRDHITIRTWERGVGLTRACGSAACATAVAAARL
KRANRLVEITLPGGKLSIEWRERDDHVLMTGTADFEYEGRFDPALFASVA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgctcgccaaccacgcatttgccaagatgaacggcattggcaacgaaatcgtc
gtggtcgatttgcgcgacaagcccgccgtcgtgacggcggaggaggcgcgtgcggtcgcc
tcgccggcgggcgtgccctatgaccagttgatggtgctgcagccgccgcggctacagggc
accgaggccttcatccgcatctacaacagtgacggttcggaggccggcgcctgcggcaac
ggcatgcgctgcgtggtgcgccgcctgttcgagcagaccggccagaccgcggtcactttc
gagacccgggccgggctgttgaactgctggaagggcccggcgcccgatctgtataccgtc
gacatgggggcgccgaaattcggctggcaggatattccgctggccgaagagtttcgcgat
acccgctacatcgaattgcaggtcggaccgatcgatgcgccggtgctgcattcaccgtcc
gtggtcagcatgggcaatccgcatgcgatcttctgggtcgatgacgtcaacgcctatgat
ctcgaccgcttcggcccgttgttggaaaatcatccgatttttccggagcgcgccaatatc
acgctcgcccatatcgtcgatcgcgatcacatcacgatccgcacctgggagcgtggcgtc
gggctgaccagggcctgcggctcggcggcgtgtgccaccgcggttgcggcggcgcggctg
aagcgcgccaatcgtctggtcgagattacgctgccgggcggaaagctctcgatcgaatgg
cgcgagcgcgacgaccatgtgctgatgacgggcaccgctgatttcgaatatgagggacga
ttcgatcctgcgctgtttgcgtccgtcgcctaa
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