Bradyrhizobium sp. Ash2021: NL528_22140
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Entry
NL528_22140 CDS
T11004
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
braa Bradyrhizobium sp. Ash2021
Pathway
braa00550
Peptidoglycan biosynthesis
braa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
braa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NL528_22140 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
braa01003
]
NL528_22140 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
braa01011
]
NL528_22140 (pbpC)
Enzymes [BR:
braa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
NL528_22140 (pbpC)
Glycosyltransferases [BR:
braa01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
NL528_22140 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
braa01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
NL528_22140 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
BiPBP_C
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
WMT78877
LinkDB
All DBs
Position
4647949..4649994
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AA seq
681 aa
AA seq
DB search
MSAVAGLIIAGAFAAWVYALGPLPLDQARQVSTTIVDRNSKLLRAYALADGRWRLPVDAK
TAIDPGYLKLLFAYEDRRFYSHGGVDPLALGRAAFQLVTRGHIVSGGSTITMQLARLMEP
RRERSVYAKLRQVVRAFQIERQLNKDEILDLYLALAPFGGNLEGVRAASIAYFGKEPKRL
SLAESALLVALPQSPETRRLDRYPDHARAARDRVLDRMVEDQIISADDAVQARAIPVPRL
RKQMPILAPHSSDTAIAIMKDTPVIRLTLDSSLQKALETLARDRAIAQGPNISIALIAVD
NESGDVLARVGSPDYFDERRAGQVDMTRALRSPGSTLKPFIYGLAFEDGFVHPESLIDDR
PIRFGTYAPENFDMTFQGTVPVRKALQLSLNVPAIALLDRVGASRLSSRLKQAGGNLVLP
KDEAPGLAMGLGGVGVTLQDLAQLYSGLALLGTTRPLREIMLAKDERDPLRLMDQAAAWQ
VGNVLIGTPPPENGVHNRIAFKTGTSYGYRDAWSVGFDGRITIGVWVGRPDGAPVPGLVG
RTAAAPILFDAFARTGKIPAALPKPPKGALLASNAKLPLPLRRFRAVGELVRTGSEQAPH
IQFPLNGSRIDVDRSNDGRFAAMPVKIAGGVLPLTMMVNGVSVGDIDSRRQRLIDPPGPG
FARLTVIDATGAADTVVIRVQ
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgtcgccggcctgatcattgccggcgccttcgccgcttgggtctacgccctc
ggcccgctgcccctcgatcaagccaggcaagtctccaccaccatcgtcgaccgcaacagc
aaactgctgcgcgcttacgccctggcggacggccgctggcggttgccggtcgatgccaaa
actgccatcgatcccggatatctgaaactgctgttcgcctacgaggaccggcgcttctat
tcgcatggcggcgtcgatccgctggcgctcggccgcgcggcctttcaactcgtgacccgc
ggccacatcgtctccggcggctcgacgatcacgatgcaattggcgcggctgatggagccg
cggcgcgaacgctcggtttacgccaagctgcgccaggtcgtgcgcgcgtttcagatcgag
cggcaattgaacaaggacgagatcctcgatctctatctggcgctggcgccgttcggcggc
aatctcgaaggcgtgcgcgccgcctcgatcgcctatttcggcaaggaaccgaaacggctg
tcgctggcggaatccgcgctattggtggcgctgccgcaatcgccggaaacgcggcggctg
gaccgttaccccgatcacgcgcgcgcggcgcgggatcgcgtgctcgaccgcatggtggaa
gaccagatcatctcggcggacgatgcggttcaagcccgggcgatcccggtgccacggctg
cgcaagcagatgccgatcctggcgccgcattcttcggatacggcgatcgcgatcatgaag
gatacgcccgtcatccggctgacgctggattcgagcctgcagaaagcgctggagacgctg
gcgcgcgaccgtgcgattgcgcaggggccgaacatttcgatagcgttaatcgccgtcgac
aatgaaagcggcgacgtgctggcccgggtcggctcgccggattatttcgacgaacggcgg
gccgggcaggtcgacatgacccgcgcgctgcgctcgcccggatcgacgctgaaaccgttc
atctatggcctcgcgttcgaagacggttttgtgcatccggaaagcctgatcgacgaccgg
ccgatccgcttcggcacctacgcgccggaaaatttcgacatgacctttcagggcacggtg
ccggtgcgcaaggcgttgcagctttccctgaacgtgcccgcgatcgcgctgctcgaccgc
gtcggcgccagccggctgtcgtcccggctgaagcaggccggcggcaatctggtgctgccg
aaggacgaagcgccggggctcgccatgggactcggcggcgtcggcgtcaccttgcaggat
ctggcacaactctattccgggctggcgctgcttggcaccacgcggccgctgcgcgagatc
atgctggccaaggacgagcgcgatcccctgcgcctgatggatcaggccgcggcctggcag
gtcggcaatgtcctgatcggcaccccgccgccggaaaacggcgtgcacaaccggatcgcg
ttcaagaccggcaccagttacggctatcgcgacgcctggtcggtcggcttcgacggccgc
atcaccatcggcgtctgggtcgggcgccccgacggcgcgccggtgccggggctggtcggc
cgcactgccgcagcgccgatcctgttcgacgcgtttgcgcgtaccggcaaaatccccgca
gccctgccgaagccgccgaagggggcgctgctcgcgagcaacgccaaactaccgctgccg
ctgcggcggttccgcgctgtcggagaactggtgcggaccggcagcgagcaggcgccgcac
atccagtttccattgaacggctcgcggatcgacgtcgatcgatcaaatgacggccggttc
gcggcgatgccggtcaaaatcgccggcggcgtgctgccgctgaccatgatggtgaacggc
gtttccgtcggcgatatcgacagccgccgccagcgcctgatcgatccgcccggaccgggt
tttgcgcggttgaccgtgatcgatgcgacgggtgccgcggataccgtcgtgatccgggtg
cagtga
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