Bradyrhizobium sp. Ash2021: NL528_22600
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Entry
NL528_22600 CDS
T11004
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
braa Bradyrhizobium sp. Ash2021
Pathway
braa03420
Nucleotide excision repair
braa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
braa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NL528_22600
03430 Mismatch repair
NL528_22600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
braa03400
]
NL528_22600
Enzymes [BR:
braa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NL528_22600
DNA repair and recombination proteins [BR:
braa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NL528_22600
MMR (mismatch excision repair)
Other MMR factors
NL528_22600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
RecR_HhH
HHH
Motif
Other DBs
NCBI-ProteinID:
WMT70913
LinkDB
All DBs
Position
complement(4752019..4754076)
Genome browser
AA seq
685 aa
AA seq
DB search
MPAAYLSSLNPEQRRAVEHGVGTDASAGPPLLVIAGAGSGKTNTLAHRVAHLIIHGADPR
RILLMTFSRRAAAEMTTRVERIARKVLGDEAGVMTDALNWAGTFHGIGARLLREYAERIG
LDPAFTIHDREDSADLMNLVRHEQGRSKTEKRFPTKGTCLAIYSRCVNAEISIEQVLGQF
FPWCAGWSSELKQLFAAYVDAKQKQNVLDYDDLLLYWAQTMAEPALAEEIGSRFDHVMVD
EYQDTNRLQSSILLALKPGGRGLTVVGDDAQSIYSFRAATVRNILDFPGQFSPNAEIVTL
DRNYRSTQPILSAANGVIGLARERFTKNLWTDRASTRKPQLVAVRDEADQARYIVERVLE
NREEGSLLKQQAVLFRTSSHSGPLEIELTRRNIPFVKFGGLKFLDAAHVKDMLALLRFVE
NPRDRVAGFRILHLLPGVGPASAQRVLDLMSEAADPLAALCGLPSPPRAGADWRDFTEAV
GNLRYGEWPADLERARLWYEPHLDRIHEDAEVRRADLIQLEQIAAGYPSRERFLTELTLD
PPDATSDQAGVPLLDEDYLILSTIHSAKGQEWKSVFVMNVVDGCMPSDLGAGTSAELEEE
RRLLYVAMTRAKDDLHLIVPQRFFTHGQNSLGDRHVYASRSRFISESLLPMFERTNWPPA
SAAAARAANQGPRIDIGARMRGMWR
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgcagcctacctttcaagcctcaatcccgaacaacggcgcgcggtcgagcatggc
gtgggaacggatgcctcggcaggaccgccgcttctcgtcatcgccggcgccggatctggc
aagaccaacaccctcgcccaccgcgtcgcgcatctgatcatccatggcgcggatccgcgg
cggatcctcctgatgacattctcgcgccgggcggccgccgaaatgaccacgcgcgtcgaa
cgcatcgcccgcaaagtgctcggcgacgaggccggggtcatgaccgacgcgctgaactgg
gccggcacatttcacggcatcggcgcgcggctgctgcgcgaatatgccgagcggatcggt
ctcgatcccgcctttacgatccacgaccgcgaggattccgccgacctgatgaacctggtc
cggcacgagcagggacgatcgaaaaccgagaagcgttttcccaccaagggcacctgcctt
gcgatctattcgcgttgcgtcaatgcggaaatctcgatcgaacaggtgctggggcagttc
tttccatggtgcgccggctggtcgagcgaactgaaacaattattcgcagcctatgtcgac
gcgaagcagaagcagaacgtgctcgattacgacgatctgctgctctactgggcgcagacg
atggcggagcctgcgctggcggaagagatcggctcgcgcttcgatcacgtgatggtcgac
gaatatcaggacaccaaccgtctgcaatcgtcgatcctgctggcgctcaagcccggcgga
cgcggactgacggttgtcggcgacgacgcgcaatcgatctactcgtttcgcgccgcgacc
gtgcgcaacattctggattttcctggccagttcagcccaaacgcagaaatcgtcaccctc
gatcgcaactaccgttcgacgcagccgatcctgtccgccgccaacggcgtcattgggctg
gccagggagcgcttcaccaagaacctctggaccgatcgcgcctcgacgcgaaagccgcaa
ctggtcgcggtgcgcgatgaggccgaccaggcgcgctacatcgtcgaacgcgtgcttgaa
aatcgcgaggaaggatcgctgctgaagcagcaggccgtgctgttccgcacctcttcgcac
agcggtccgctcgagatcgagttgacccgccgcaacattcccttcgtgaaattcggcggg
ttgaaatttctcgacgccgcccacgtcaaggacatgctggccctgcttcggttcgtggaa
aatccccgcgaccgtgtcgcaggcttccggatcctgcatctgttgccgggcgtgggaccg
gcgtcggcgcagcgcgtgctcgacctcatgagtgaggccgccgatccgcttgcagcactg
tgcggcctgccgtcgccgccccgcgccggcgcggactggcgcgacttcaccgaggcggtc
ggcaatctgcgctatggcgaatggcccgccgatctcgagcgcgcgagactctggtacgag
ccgcatctggatcgcattcacgaagacgccgaggttcgccgcgccgatctgatccagctc
gagcagatcgcggccggctatccctcgcgcgaacggttcctgaccgagctcacgctcgat
ccgccggacgccaccagcgaccaggccggcgtgcccctgctcgacgaggattatctgatc
ctgtcgacgattcactcggccaaaggtcaggagtggaagtcggtgttcgtgatgaacgtg
gtcgacggctgcatgccgtccgatctgggcgcgggcacttcggcggaactggaggaggag
cggcgattgctttatgtcgccatgacccgcgccaaggacgatctgcacctcattgtgccg
caacgcttcttcactcacggccagaattcactcggcgaccgccacgtctacgcctcacgg
tcccgcttcatttcagaatccctgctgccgatgttcgagcggaccaattggccgccggcc
tccgcggccgcggcgcgcgcggccaaccagggaccgcgcatcgatatcggcgcccgcatg
cgcggtatgtggcgctga
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