Bradyrhizobium sp. Ash2021: NL528_23070
Help
Entry
NL528_23070 CDS
T11004
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
braa Bradyrhizobium sp. Ash2021
Brite
KEGG Orthology (KO) [BR:
braa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
braa03009
]
NL528_23070 (rimO)
Enzymes [BR:
braa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NL528_23070 (rimO)
Ribosome biogenesis [BR:
braa03009
]
Prokaryotic type
ribosomal protein modification factors
NL528_23070 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
NTPase_1
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WMT70997
LinkDB
All DBs
Position
complement(4853230..4854555)
Genome browser
AA seq
441 aa
AA seq
DB search
MQQAGAPKVSFVSLGCPKALVDSERIITRLRAEGYELARKHDGADIVIVNTCGFLDSAKQ
ESLGAIGEAMAENGRVIVTGCMGAEPEQIEAAYPGVLSITGPQQYESVLDAVHRALPPVH
NPHLDLVPPQGIKLTPRHYAYLKISEGCNNRCSFCIIPKLRGDLVSRPAGDVLREAEKLV
AAGVKELLVISQDTSAYGVDLKYAESPWKDREVRAKFFDLAKELGELGAWVRLQYVYPYP
HVDEVIGLMTDGKVLPYLDIPFQHASPEILKAMKRPAAQEKTLARIQKWREQCPDLTLRS
TFIVGFPGETDSDFAYLLDWLEEAEIDRLGCFKYEPVAGAASNAIGNAVPQEVKQERWDA
LMARQQKISARRLKRKVGTRQQIIIDEVGPTVSKGRSKADAPEIDGAVYLSSRRTLRVGE
IVTAKIERADQYDLHGSIAGF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaggccggagcgccgaaagtcagctttgtctccttgggatgccccaaggcgctg
gtggattcggagcgcatcatcacgcggctgcgcgcggaaggctatgagctggcgcgcaag
catgacggggccgatatcgtcatcgtcaacacctgcggcttcctcgacagcgccaagcag
gaatcgcttggcgccatcggcgaggcaatggccgagaacggcagggtcatcgtcaccggc
tgcatgggcgcggagcccgagcagatcgaggcggcctatcccggcgtgctctccatcacc
ggcccgcagcaatatgagagcgtgctggacgcggtgcaccgcgcgctgccgccggtccac
aatccgcacctcgacctggtgccgccgcagggcatcaagctgacgccgcggcactacgcc
tatttgaagatttccgaaggctgcaacaaccgctgcagcttctgcatcattccgaaattg
cgcggcgatctggtctcgcgcccggccggtgacgtgttgcgcgaggcggaaaaactggtt
gccgccggcgtcaaggaattgctcgtcatctcgcaggacacctcggcctatggcgtcgac
ctgaaatatgccgagagcccgtggaaggatcgcgaggtccgcgcgaaatttttcgatctg
gcaaaagagctcggtgaactcggcgcctgggtccggctgcaatatgtctacccctacccg
catgtcgacgaagtcatcggcctgatgaccgacggcaaggtgctgccctatctcgatatc
cccttccagcatgcgagcccggaaatcctcaaggccatgaagcgccccgccgcgcaggag
aagacgctggcgcggatccagaagtggcgcgagcaatgccctgatttgacgctgcgctcg
accttcatcgtcggcttccccggcgagaccgattccgactttgcgtatttgctcgactgg
ctcgaggaggccgagatcgatcgcctcggttgcttcaaatatgagccggtcgcgggcgct
gcatcgaatgccatcggcaatgctgtgccacaggaggtcaagcaggagcgctgggatgcg
ctgatggcccgtcagcagaagatttcggcgcggcgcttaaagcgcaaggtcggcacgcgg
cagcagatcatcatcgacgaagtcggccccaccgtctcgaagggccgctccaaggccgac
gcgcccgagatcgacggcgcggtctatctgtcgagccggcgtaccttgcgtgtcggcgaa
atcgtcaccgccaagatcgagcgcgcagatcaatacgacctccacggcagcatcgcgggc
ttctaa
DBGET
integrated database retrieval system
