Bradyrhizobium sp. Ash2021: NL528_25020
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Entry
NL528_25020 CDS
T11004
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
braa Bradyrhizobium sp. Ash2021
Pathway
braa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
braa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NL528_25020 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
braa03400
]
NL528_25020 (xth)
Enzymes [BR:
braa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NL528_25020 (xth)
DNA repair and recombination proteins [BR:
braa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NL528_25020 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
WMT71358
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All DBs
Position
5212478..5213269
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AA seq
263 aa
AA seq
DB search
MRIATWNVNSVRQRIEHLVSWLQECAPDIVCLQEIKCVDDAFPRLEIEALGYNVVTHGQK
TFNGVALLSKLPFEETKSGLAGDDEDAHARFLEGVVTLKTGVVRIACLYLPNGNPVGSDK
YPYKLKWMSRLLEYSKERLKAEEPLILAGDFNVIPAAQDVHNPAAWVEDALFRPATREAF
QSLLGLGLTDALRAVSDAPGQYTFWDYQAGAWQKNWGLRIDHLLLSPQASDRLIDVGVDS
YVRAWEKPSDHVPVWADLDFEVA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgcgacatggaacgtcaattcggtccggcagcggatcgagcatctcgtcagc
tggctgcaggagtgcgcgccggacatcgtctgcctgcaggaaatcaaatgcgtcgacgac
gcctttccgcggctggagatcgaggcgctcggctacaacgtcgtcacccacggccagaag
acgttcaacggcgtcgccctgctgtcgaagctgccgttcgaggagaccaaatccggcctc
gccggcgacgacgaggacgcccacgccaggttcctggaaggcgtggtcacgctgaaaacc
ggcgtggtgcggatcgcctgtctttatctgcccaatggcaacccagtcgggtccgataaa
tatccatacaaactcaaatggatgtcgcgacttcttgagtattcgaaggagcggcttaag
gcggaagagccgctgatcctcgccggcgacttcaacgtgattccggccgcccaggacgtc
cataatccggcggcctgggtcgaggacgccctgttccgcccggccacccgcgaggccttc
cagtcgttactgggcctcgggctgaccgatgcgctgcgcgccgtcagcgatgcgcccggc
caatacaccttctgggactatcaggccggcgcctggcagaagaactggggcctgcggatc
gaccacctgctgctgtcgccgcaggcgagcgaccggctgatcgatgtcggagtcgacagc
tatgtgcgcgcctgggaaaagccgtcagaccacgtgccggtctgggccgatctggatttc
gaggtggcgtag
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