Bradyrhizobium sp. Ash2021: NL528_25245
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Entry
NL528_25245 CDS
T11004
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
braa Bradyrhizobium sp. Ash2021
Pathway
braa00541
Biosynthesis of various nucleotide sugars
braa01100
Metabolic pathways
braa01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
braa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NL528_25245 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
braa01005
]
NL528_25245 (kdsA)
Enzymes [BR:
braa01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
NL528_25245 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
braa01005
]
Lipid A
NL528_25245 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
WMT71400
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Position
complement(5263988..5264851)
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AA seq
287 aa
AA seq
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MNANISAAPVVTAGAVKFGNDLPISIIAGPCQLESRAHALEVAGALKEIAARLGIGLVYK
TSFDKANRTSVSAARGIGLKQALPIFAEIRGSLGLPVLTDVHEASQCAEVAQAVDVLQIP
AFLCRQTDLLLAAAATGKVVNVKKGQFLAPWDMANVVAKITGANNPNVLVTERGASFGYN
TLVSDMRALPILARTTNAPVIFDATHSVQQPGGKGTSSGGEREFVPVLARAAVAVGVAGV
FIETHPDPDSAPSDGPNMVPLREFEGLVRTLMGFDALAKNLSKHAAR
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcgaacatctctgcagccccggtcgtaacggcgggcgcggtcaaattcggcaac
gatctgccgatttcgatcatcgccggcccgtgccagctcgagagccgcgcgcatgcgctg
gaagttgcgggtgcgctgaaggagatcgcggcgcggctcggaatagggctggtctacaaa
acctccttcgacaaggccaaccgcaccagcgtttccgccgcgcgcggcatcgggttaaag
caggcgttgccgatttttgcggagatacgcggctcgctcggtctgcccgtcctcaccgac
gtgcacgaggcctcgcaatgcgccgaggtggcgcaggcagtggatgtcctgcaaatcccg
gccttcctgtgccggcagaccgatttgctgctggcggcggccgcgaccggcaaggtcgtc
aacgtcaagaaggggcagtttttggcgccgtgggacatggccaatgtcgtcgccaagatc
accggcgccaacaatcccaacgtgctggtcaccgagcgcggcgcgtcgttcggctacaac
acgctggtctcggacatgcgggcgctgccgatcctcgcgcgaacaactaatgccccggtc
attttcgatgccacccattcagtgcagcagcccggcgggaaggggacttcatcgggcggc
gagcgcgaattcgtcccggtgctggcccgcgccgcggtcgcggtcggggttgccggtgtg
ttcatcgaaacccatcccgatcccgattctgcgccgtccgacggccccaacatggtgccg
ctgcgcgaattcgaaggtctggtacggaccctgatggggttcgacgcgctcgccaagaac
cttagcaagcacgcagcgcgttga
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