Bradyrhizobium sp. Ash2021: NL528_25610
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Entry
NL528_25610 CDS
T11004
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
braa Bradyrhizobium sp. Ash2021
Pathway
braa03030
DNA replication
braa03430
Mismatch repair
braa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
braa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NL528_25610 (dnaE)
03430 Mismatch repair
NL528_25610 (dnaE)
03440 Homologous recombination
NL528_25610 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
braa03032
]
NL528_25610 (dnaE)
03400 DNA repair and recombination proteins [BR:
braa03400
]
NL528_25610 (dnaE)
Enzymes [BR:
braa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NL528_25610 (dnaE)
DNA replication proteins [BR:
braa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NL528_25610 (dnaE)
DNA repair and recombination proteins [BR:
braa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NL528_25610 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
DUF6374
T2SSK
DUF655
Motif
Other DBs
NCBI-ProteinID:
WMT71472
LinkDB
All DBs
Position
complement(5334499..5338011)
Genome browser
AA seq
1170 aa
AA seq
DB search
MSSAGFVHLHVHSAYSLLKGSIKIQKLGELAKADRQPALALTDTDNMFGALEFSDKMAGY
GIQPIIGCELAIDFGDQDPNARNALASAPSRIVLLAARERGYRSLMRLNSRAFLETPVHQ
SPHIKFEWLEGDAEDLIALTGGPDGPISLAIHGDHAALAATRCDRLASLFGDRLYVELQR
HGIEKERRAEAGLIDLAYAKGLPLVATNEPYFAANDDYEAHDALLCIAGGRLIAETDRDQ
LTPDHRFKTRAEMAVLFADIPEALASTVEIAERCSFRPKTRKPILPRFTVGAGSNAADAE
AEEAAELRRQAEAGLSHRLKVHGLAPGMTEETYQARLAFELDVITRMNYAGYFLIVADFI
QHAKSEGIPVGPGRGSGAGSLVAYALTITDLDPIRFGLLFERFLNPERVSMPDFDIDFCQ
DRRGEVIDYVQQRYGRDQVAQIITFGTLQARGVLRDVGRVLQMPYGQVDKLTKLVPQNPA
APVTLAAAIASEPKLQAFRDEDAVVARAFDIAQRLEGLTRHASTHAAGIVIGDRPLSELV
PLYRDPKSDMPVTQFNMKWVEPAGLVKFDFLGLKTLTVLDVAVKLLKQRHIEIDLATLPL
DDAPSYQMLAKGDVVGVFQVESQGMRRALVDMRPDRFEDIIALVALYRPGPMANIPTYCA
RKHGDEEPEYLHPLLEPILKETFGVIIYQEQVMQIAQVMAGYSLGDADLLRRAMGKKIRS
EMEKQRAIFVAGSVKNGVPKGQADTIFELLAKFADYGFNKSHAAAYALVSYHTAYMKAHY
PVEFLAASMTLELNNTDKLSEFRAEAQRLGIKVEAPNINRSGATFEVSDNTIYYALAALK
GVGPQAVELIVATRKEGAFTSLADFAARANPRAINKRVIESLAAAGAFDTLDSNRARVFG
GAEAILAACQRSHEAATLGQNDMFGGASDAPTIMLPQVEPWLPAERLRREYDAIGFFLSG
HPLDDYATVLKRLRVQSWAEFSRAVKTGATAGKVAATVVSRMERRTKTGNKMGIMGLSDP
TGHFEAVLFSEGLAQYRDVLEPGAAVLLQLGAELQGEDVRARVLHAEPLDAAAAKTQKGL
RIFVRDTKPLDSIAKRLNMPEAAAPGGPARIPQVKPAPAPADGANGDVSLVIMLDLETEV
EMKLPGRFKVSPQIAGAIKAVSGVVDVQTL
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtgccggattcgttcatctccacgttcattcggcctattcgctgctgaagggc
tcgatcaagatccagaagctcggcgaactcgccaaggcggaccgccagccggcgctggcg
ctgaccgacaccgacaacatgttcggggcgctggaattctccgacaagatggcgggctac
ggcatccagccgatcatcggctgcgagctcgcgatcgactttggcgaccaggatcccaat
gcgcgcaatgcgctggcttcggcgccttcccgaatcgtattgctggcggcgcgcgagcgc
ggctatcgcagcctgatgcggctgaactcacgggcgttcctggagacgccggtccatcag
tccccgcacatcaagttcgagtggctggagggcgatgccgaggatttgatcgcgctcacc
ggcggtcccgacgggccgatctcgctggcgattcacggcgatcatgcagcccttgccgcg
acgcgctgcgaccggctggcgagcctgttcggcgatcgcctctatgtcgagctgcaacgt
cacggcatcgagaaggagcgccgcgccgaggccggcttgatcgatctggcctacgccaag
ggactgccgctggtcgcgaccaacgagccgtactttgccgccaacgatgattacgaagcc
catgacgcgctgttgtgtatcgccggcggccggttgatcgccgagaccgatcgcgatcag
ctcacgcccgatcaccgcttcaagacccgggccgaaatggcggtattgttcgccgacatt
ccggaggcgctggcatcgacggtggagatcgcggagcgctgttcgttccggccgaagacg
cgcaagccgatcctgccgcgcttcacggtcggcgccggcagcaatgcagccgacgccgaa
gccgaggaggccgccgaactgcggcgccaggccgaggcgggtcttagccatcgcctgaag
gtccacggcctcgcgccgggcatgaccgaggaaacctatcaggcgcggctggcgttcgaa
ctcgatgtcatcacccgcatgaactatgcgggctacttcctgatcgtggccgatttcatc
cagcacgcaaaatccgagggcattccggtcgggccgggtcgcggctccggcgcgggatcg
ctggtcgcctatgcactgaccatcaccgacctcgatccgatccgcttcggccttctgttc
gagcgcttcctcaatcccgaacgcgtctcaatgcccgacttcgacatcgacttctgccag
gaccgccgcggtgaggtgatcgactacgtgcagcagcgctacggccgcgatcaggtggcg
cagatcatcaccttcggtacgctgcaggcgcgcggcgtgctgcgcgacgtcggccgcgtg
ctgcagatgccctatgggcaggtcgacaagctgaccaaactggtgccgcagaatcccgcc
gcgccggtgacgctggccgcggcgatcgccagcgaaccgaagctgcaggcgtttcgcgac
gaggatgcggtggtggcccgcgccttcgacatcgcccagcgcctcgaaggcctgactcgg
cacgcttccacccacgccgccggtattgtgatcggcgaccgtcccttgagcgaactggtg
ccgctctatcgcgatcccaaatccgacatgccggtgacccagttcaacatgaaatgggtc
gagcccgcggggctggtgaaattcgacttcctcggcctgaagacgctcaccgtgctcgac
gtcgcggtcaaactgctcaagcagcgccacatcgaaatcgacctcgcgactttgccgctc
gacgatgccccgagttaccagatgctggccaagggcgatgtggtcggcgtgttccaggtg
gaaagccagggcatgcgccgcgcgctggtcgacatgcggcccgaccgcttcgaggacatc
atcgcgctggtggcgctgtatcgtccgggcccgatggcgaacattccgacctattgcgcg
cgcaagcatggcgacgaggagccggaatatctgcacccgctgctcgagccgatcctgaag
gagacgttcggcgtcatcatctatcaggaacaggtgatgcagatcgcccaggtgatggcc
ggttactcgctcggcgacgccgatttgctgcgccgcgcgatgggcaagaagatccgctcc
gagatggaaaagcagcgcgcgatcttcgtggccggctcggtcaagaacggcgtgccgaaa
gggcaggcggacaccatcttcgaattgctcgccaaattcgccgactacggcttcaacaag
agccatgcggcggcctatgcgctggtgtcgtatcacaccgcctatatgaaggcgcattat
ccggtcgagttcctggccgcgtcgatgacgctcgaactcaacaacaccgacaagctgtcg
gagtttcgcgccgaggcgcagcggctcgggatcaaggtcgaggcgcccaatatcaaccgt
tcgggggcgaccttcgaagtcagcgacaacacgatctattacgcgctggccgcgctgaag
ggcgtcggcccgcaggccgttgagctgatcgtggcgacgcggaaagagggcgccttcacc
tcgctggccgatttcgccgcgcgcgccaatccgcgtgcgatcaacaagcgcgtcatcgaa
agcctggccgcggccggcgccttcgacacgctcgattcgaaccgcgcgcgggtatttggc
ggcgcagaggcgatcctggcggcgtgccagcgcagccatgaggccgcgacgctcgggcag
aacgatatgttcggcggcgcctccgacgcaccgaccatcatgctgccgcaggtcgagccc
tggttgccggccgagcggctgcggcgcgaatacgacgccatcggcttcttcctgtccggc
catccgctggatgattacgccaccgtcttgaaacggttgcgggtgcagtcgtgggcggaa
ttttcgcgcgcggtcaaaaccggcgcgaccgccggcaaggttgccgcgaccgtggtgtcg
cgcatggaacggcgcaccaagaccggcaacaagatgggcatcatgggcctgtcggacccg
accggccatttcgaagccgtgttgttctccgaaggccttgcgcaatatcgcgacgtgctg
gagccgggcgccgccgtgctgctgcaactcggcgctgagctacagggcgaggacgtgcgg
gcgagggtgctacacgccgaaccgctcgacgccgccgcggccaaaacccaaaaggggctg
cgcatcttcgtgcgcgataccaaaccgctggattccattgcgaagcgtctgaacatgccg
gaggctgcggcgcccggcggcccggcccgcatcccgcaggtcaaacccgcgccagccccg
gcggacggagccaatggcgacgtctcgctcgtcatcatgctcgaccttgaaaccgaggtc
gaaatgaaactcccgggccgcttcaaggtctcgccgcagatcgccggcgcgatcaaggcg
gtgtcgggcgtggtggacgtgcagacgctgtga
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