Bradyrhizobium sp. Ash2021: NL528_26720
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Entry
NL528_26720 CDS
T11004
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
braa Bradyrhizobium sp. Ash2021
Brite
KEGG Orthology (KO) [BR:
braa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
braa03032
]
NL528_26720 (topA)
03400 DNA repair and recombination proteins [BR:
braa03400
]
NL528_26720 (topA)
Enzymes [BR:
braa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NL528_26720 (topA)
DNA replication proteins [BR:
braa03032
]
Prokaryotic type
DNA Topoisomerases
NL528_26720 (topA)
DNA repair and recombination proteins [BR:
braa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NL528_26720 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Milton
CFAP126
Motif
Other DBs
NCBI-ProteinID:
WMT71673
LinkDB
All DBs
Position
5551025..5553784
Genome browser
AA seq
919 aa
AA seq
DB search
MNIVIVESPAKAKTINKYLGSSYEVLASFGHVRDLPAKNGSVDPDANFQMIWEIDPKAAG
RLNDIAKALKGADRLILATDPDREGEAISWHVLEVLKEKRAIKDHKIERVVFNAITKQAV
TDAMKAPRQIDGALVDAYMARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
ELEIEKFVAREYWSLVATLTTPRGDAFEARLVGADGKKIQRLDIGTGAEAEELKKAIEAA
NFTVSTVEAKPARRNPQAPFTTSTLQQEASRKLGFAPAHTMRIAQRLYEGIDIGGETTGL
ITYMRTDGVQIDGSAITQARKVIGEDYGNAYVPDAPRQYVSKAKNAQEAHEAIRPTDLSR
RPAEMRRRLDHDQARLYELIWIRTIASQMESAELERTTVDIAAKAGSRVLDLRASGQVIK
FDGFLALYQEGRDDDGDDEDSRRLPSMSEGEALKRQNLAVTQHFTEPPPRFSEASLVKRM
EELGIGRPSTYASILQVLKDRGYVKLEKKRLHGEDKGRVVVAFLENFFARYVEYDFTADL
EEQLDRISNNEISWQQVLKNFWTGFIGAVNDIKDLRVSEVLDALDDMLGPHIYPPRADGG
DVRQCPTCGTGKLNLKAGKFGAFVGCSNYPECRYTRPLAADGEASADRILGKDPAADLDV
TVKAGRFGPYIQLGEQKDYAEGEKPRRAGIPKNMSPGDMELELALKLLSLPREIGKHPET
GEPITAGIGRFGPFVRHEKTYASLEAGDEVFDVGLNRAVTLIAEKIAKGPSGRRFGADPG
KPLGEHPSLGGVAVKNGRYGAYVTAGGVNATIPSDKTLETITLEEAIALIDERAAKGGGK
PKRGAKKAAPKKATAKTAADPDAPKAAKKAAVKKAAAKPKSEAVSKARAPVASAAKTSAA
KPPPASKTPAKKSAGKARG
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgtcatcgtggagtcgccggcgaaagccaagaccatcaataagtatttgggc
tcttcctacgaggttctggcctcgttcgggcatgtccgcgatctcccggccaagaacgga
tcggtcgatccggacgccaattttcagatgatctgggagatcgaccccaaggcggccggc
cggctcaacgacatcgccaaggcgctgaagggcgccgaccgcctgattctcgcaaccgac
cccgatcgggagggtgaggcgatctcctggcacgtgctggaagtgctgaaggaaaagcgc
gcgatcaaggaccacaagatcgagcgcgtggtgttcaacgccatcaccaagcaggcggtg
acggacgcgatgaaagcgccgcgccagatcgatggcgcgctggtcgacgcctatatggcg
cgccgcgcgctggactatctggtcggcttcacgctctcgccggtgctgtggcgcaagctg
ccgggcgcgcgctcggccggccgcgtgcagtcggtcgcgctgcggctggtctgcgaccgc
gaactcgaaatcgagaaattcgtcgcccgcgaatactggtcgctggtggcaacgctaacg
acgccgcgcggcgacgccttcgaggcccgcctggtcggcgccgacggcaagaagatccag
cggctcgacatcggcaccggcgcggaagccgaagagctcaagaaagcgatcgaagccgcc
aacttcacggtctcgaccgtcgaagccaaacccgcgcggagaaatccgcaggcgcccttc
accacctcgacactgcagcaggaagccagccgcaagctcggctttgccccggcgcatacg
atgcggatcgcgcagcggctctatgaaggcatcgatatcggcggcgagaccaccggtctc
atcacctatatgcgaaccgacggcgtgcagatcgacggctcggcgatcacgcaggcccgc
aaggtgatcggcgaggattacggcaacgcctatgtgccggacgcgccgcgccagtatgtg
agcaaggccaagaacgcccaggaagcgcatgaagcgatccgcccgaccgacctgtcgcgc
cgtcctgccgaaatgcgccgccgcctcgatcacgatcaggcccggctgtatgagctgatc
tggatccgcaccatcgccagccaaatggaatcggcggaactggaacgcaccaccgtcgac
atcgccgccaaagccggctcccgcgtgctcgacctgcgcgccagtggccaggtcatcaaa
ttcgacggctttctggcgctctatcaggaaggccgcgacgacgacggcgacgatgaagat
agccgccgcctcccctccatgagcgagggcgaagcgttgaaacggcagaacctcgccgtc
acgcaacacttcaccgaaccgccgccgcgcttctccgaagcgtcgctggtcaagcgcatg
gaagagctcggcatcggccgtccctcgacctacgcctcgatcctgcaggtgctgaaggac
cgcggctacgtcaagctggagaagaaacggctgcatggcgaggacaagggccgcgtcgtg
gtcgcgttcctggagaattttttcgcacgctatgtcgagtacgatttcaccgccgatctg
gaagagcagctcgaccgcatctccaacaacgagatttcctggcagcaggttctgaagaat
ttctggaccggctttatcggcgcggtcaatgacatcaaggatctccgcgtttcggaagtg
ctcgatgcgctcgacgacatgctgggaccgcacatctatccgccgcgcgcggatggcggc
gatgtcaggcagtgcccgacctgcggcaccggcaagctcaatctgaaagccggcaagttc
ggcgccttcgtcggttgctcgaattatccggaatgccgttacacccgcccgctcgccgcc
gacggcgaagccagcgccgaccgtatcctgggcaaggatcccgcggccgatctggacgtg
acggtgaaggccggacgcttcggcccctacatccagctcggcgagcagaaggattatgcc
gagggcgagaagccgcgacgcgccggaatcccgaagaacatgtcgcccggcgatatggaa
ctggagctggcgctcaaactgctgtcgctgccgcgcgaaatcggaaaacacccggagacc
ggtgagccgatcaccgccggcatcggccgtttcggtccgttcgtgcgccatgagaagacc
tatgccagcctcgaggccggcgatgaggtgttcgacgtcggcctcaaccgcgcggtgacg
ctgatcgccgaaaagatcgcaaagggcccgagcggccggcgcttcggcgccgatcccggc
aagcccctgggcgagcatccgagccttggcggcgtcgcggtcaagaacggccggtacggc
gcctatgtcacggccggcggcgtcaacgccacgatcccgagcgacaagacgctggagacc
atcacgctcgaggaagccatcgccctgatcgatgaacgcgcggccaagggcggcggcaag
ccgaagcgcggggcgaagaaagcagcaccaaagaaagccacggccaagaccgctgccgat
cccgacgcgccaaaagccgccaagaaggcggcggtgaagaaggccgctgcaaagccgaaa
tccgaagccgtgagcaaggcccgggcgccggtcgcgtccgcggccaagacgtcggcggcg
aaaccaccacccgcatcaaaaacgcctgcgaagaaaagcgcgggcaaggcccggggataa
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