Bradyrhizobium sp. Ash2021: NL528_27675
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Entry
NL528_27675 CDS
T11004
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
braa Bradyrhizobium sp. Ash2021
Pathway
braa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
braa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NL528_27675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
braa03021
]
NL528_27675
03400 DNA repair and recombination proteins [BR:
braa03400
]
NL528_27675
Enzymes [BR:
braa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NL528_27675
Transcription machinery [BR:
braa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NL528_27675
DNA repair and recombination proteins [BR:
braa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NL528_27675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
RNA_pol_L_2
HHH_XRCC3_RpoA
IDH
Motif
Other DBs
NCBI-ProteinID:
WMT71844
LinkDB
All DBs
Position
complement(5752785..5753816)
Genome browser
AA seq
343 aa
AA seq
DB search
MGDTVTIQKNWQELIRPNKLQITPGTDATRFATVVAEPLERGFGQTLGNALRRILLSSLQ
GAAVQSVHIDGVLHEFSSIAGVREDVTDIVLNIKDIAIKMQGEGPKRMVVKKQGPGAVTA
GDIQTVGDVVVLNPDLQICTLDEGAEIRMEFTVASGKGYVAAERNRPEDAPIGLIPVDSL
FSPVRKVSYKVENTREGQILDYDKLTMTIETNGAITPEDAVAYAARILQDQLNVFVNFEE
PRKEVAQEIIPDLAFNPAFLKKVDELELSVRSANCLKNDNIVYIGDLVQKSEAEMLRTPN
FGRKSLNEIKEVLAQMGLHLGMEVPGWPPENIDELAKRFEDHY
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacacagtgacgatccagaaaaattggcaagaacttattcgaccgaacaagttg
cagatcacgcctggcaccgacgcgacccggttcgcgaccgttgtcgccgagccgctcgag
cgcggcttcggccagacgctcggtaacgcgctgcgccgcatactgttgtcctcgctgcag
ggcgctgcggtgcagtcggtgcacatcgacggcgtgctgcacgagttctcctcgatcgcg
ggcgttcgcgaggacgtcaccgacatcgtgctcaacatcaaggacatcgcgatcaagatg
cagggcgaaggccccaagcgcatggtcgtgaagaagcagggcccgggcgccgtcaccgcc
ggcgacatccagaccgtcggcgatgtcgtggtgctcaatcccgacctacagatctgcacc
ctcgacgagggcgcggaaatccgcatggaattcaccgtcgcttccggcaagggctatgtc
gccgccgagcgtaaccgtcccgaggacgcgccgatcggcctgatcccggtcgacagcctg
ttctccccggtccgcaaggtctcctacaaggtcgagaacacccgcgagggccagatcctc
gactacgacaagctgaccatgacgatcgagaccaacggcgcgatcacgccggaagacgcg
gtggcctacgccgcccgcatcctgcaggatcagctcaacgtgttcgtgaacttcgaagag
ccgcgcaaggaagtggcgcaggagatcatccccgatctcgcgttcaacccggcgttcctc
aagaaggtcgacgaactcgaactgtcggtgcgttcggcaaactgcctgaagaacgacaac
atcgtctatatcggcgacctcgtgcagaagtcggaagcggaaatgctccgtaccccgaac
ttcggccgcaagtcgctgaacgagatcaaggaagtgctggcccagatgggtctgcatctc
ggcatggaagtgccgggctggccgccggagaatatcgacgagttggccaagcgtttcgaa
gatcattattga
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