Bradyrhizobium sp. Ash2021: NL528_36920
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Entry
NL528_36920 CDS
T11004
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
braa Bradyrhizobium sp. Ash2021
Pathway
braa03420
Nucleotide excision repair
braa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
braa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NL528_36920
03430 Mismatch repair
NL528_36920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
braa03400
]
NL528_36920
Enzymes [BR:
braa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NL528_36920
DNA repair and recombination proteins [BR:
braa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NL528_36920
MMR (mismatch excision repair)
Other MMR factors
NL528_36920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
HHH
DEAD
Motif
Other DBs
NCBI-ProteinID:
WMT79210
LinkDB
All DBs
Position
complement(7689302..7691365)
Genome browser
AA seq
687 aa
AA seq
DB search
MQTATAYLESLNPEQRRAVEHGAAGGLAAAPLLVIAGAGSGKTNTLAHRVAHLIVQGADP
RRILLMTFSRRAASEMTKRVERIARKVMGDNAGIFTDALSWAGTYHGIGARLLREYAEQI
GVDPAFTIHDREDSADLMNLIRHEKGFSKTESRFPTKGTCISIYARCVNAEMPIEKVIGT
FYPWCSGWAAELKELFAAFVEAKQKQNVLDYDDLLLYWAQMVSDASLADHIGGRFDHVLV
DEYQDTNRLQSSILLALKPGGRGLTVVGDDAQSIYSFRAATVRNILDFPDQFSPPAHIIT
LDRNYRSTQTVLAAANGVIGLAKERFTKNLWTERTSAAKPQLVSVRDEADQARYIVERIM
ENRESGTLLKEQAVLFRTSSHSGPLEIELTRRNIPFVKFGGLKFLDAAHIKDMLALLRFV
ENPRDRVAGFRLLHLLPGIGSATAQRVLDRMAEATDPITALAGLPTPPRAGDDWKGFVET
LGNLRYSEWPVDLERARLWYEPHLDRIHEDAETRRADLLQLEQIASGYPSRERFLTELTL
DPPGATSDQAGVPLLDEDYLILSTIHSAKGQEWKSVYLLNVVDGCMPSDLGAGTSAEIEE
ERRLLYVAMTRAKDDLHLIVPQRFFVHGQLAQGDRHLYASRTRFIPEKLLGLFEQTAWPI
VPASASARAASQGPKVDIGARMRGMWR
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
gtgcagaccgcaacggcctaccttgaatccctcaatccggaacagcgacgggccgtcgag
cacggcgcggcaggtggattggccgcggcgcccctgctcgtcattgctggcgctggttcc
ggaaagaccaacaccctggcccaccgggtcgcccatctgatcgttcaaggcgccgatccc
cggcgaatcttgctgatgacgttttcccgtcgtgcggcttccgagatgaccaagcgcgtc
gagcgcatcgcccgcaaggtcatgggcgacaacgccggcatctttacagacgcgctcagt
tgggccggaacctaccacggcataggtgcgcggctcctgcgcgaatacgccgaacagatc
ggcgtggatcccgcttttacgatccacgaccgcgaagactctgccgacctcatgaatctt
atcaggcatgagaagggtttctcgaagaccgaaagccgctttcctaccaaagggacctgc
atctcgatctacgcgcgctgcgtcaacgccgagatgccgatcgagaaggtcattggcact
ttctatccgtggtgctcgggctgggcggcggagctcaaggaacttttcgcagcctttgtc
gaggccaagcagaagcagaacgtgctcgattacgacgatctgctgctctactgggcgcag
atggtaagcgacgccagcctcgccgaccacattggtggccgcttcgaccacgtccttgtc
gacgaataccaggatacgaaccgtcttcaatcctcgatcctgctggcgctcaaacctggg
gggcgcggtttgacggtggtcggcgacgacgcccagtcgatctactcattccgcgccgcg
accgtgcgcaacatcctcgattttccggaccagttctcccctccggcgcacatcatcacg
ctcgaccgcaactatcgctcgacgcaaacggttctggctgcggccaacggcgtcatcggt
ctcgccaaggaacgcttcaccaagaacctttggaccgaacgtacctccgcagcaaagccg
caactcgtctctgttcgggatgaggccgaccaagcgcgctacatcgtcgaacgtatcatg
gaaaaccgagaatccggcacgcttctcaaggaacaagccgtgctgttccggacgtcgagc
cacagcggcccgctcgaaatcgaactgacacgtcgaaatattcccttcgtcaaattcggc
ggcctgaagtttctagatgccgcccacatcaaggacatgctggcgctgctgcggtttgta
gagaacccacgcgatcgggtcgccggattccgcctgctgcacctcctgcccggcatcgga
tcggcaaccgctcagcgtgtgctcgatcgcatggccgaggcaacagaccctatcaccgcg
ctggcgggtcttccgacgccaccgcgcgccggcgacgactggaaaggcttcgtcgagaca
ctaggcaacctccgatattcggagtggcccgtcgatctggagcgggcccgtctttggtac
gaaccgcatctcgaccgcatccacgaagacgccgagactcgaagggcggacctgctccag
cttgagcagatcgcgtccgggtatccctcgcgcgaacgcttcctgaccgagctcacattg
gacccaccgggtgccaccagcgaccaggcgggcgtgccgctgctcgacgaggactatctg
atcctgtcgacgatccattccgccaagggccaggaatggaaatcagtttatctactcaat
gtcgtcgacggctgcatgccttctgatctcggcgcaggcacctccgcggagatcgaggag
gagcgtcgtctgctatacgtggccatgacccgcgccaaggacgacctgcatctaatcgta
ccgcagcgcttcttcgtgcacggccagcttgcgcagggcgatcgacacctctacgcctca
aggacccgtttcattcccgagaagctccttggtctgttcgaacagaccgcgtggcccatt
gtgccggccagcgccagcgcacgtgccgccagtcaagggcccaaggtggatatcggcgcc
cggatgcgcggaatgtggcgataa
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