Bradyrhizobium sp. Ash2021: NL528_39920
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Entry
NL528_39920 CDS
T11004
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
braa Bradyrhizobium sp. Ash2021
Brite
KEGG Orthology (KO) [BR:
braa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
braa01002
]
NL528_39920
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
braa01011
]
NL528_39920
Peptidases and inhibitors [BR:
braa01002
]
Cysteine peptidases
Family C82
NL528_39920
Peptidoglycan biosynthesis and degradation proteins [BR:
braa01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
NL528_39920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
WMT74013
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All DBs
Position
8321872..8324046
Genome browser
AA seq
724 aa
AA seq
DB search
MRDCSKSRAGFDRVLMAVAATFLTVTATSALAQDTPRASAAELAIDAAIPRPEPANVPPP
TASDFKIDATASVPDAGKTAEPKATEATEKAPETKTTEKSVEPKPAETATAPAPAPKASD
TATVTPAAAPAATAVAPAAEPAKEPVKAASNVAPEDQPVADKLREMLGGKSLRYFDRKAE
RAAVEKFYGAREYAPVWTQAGKLTDSGKGVVARLKDAAADGLNSADYPVPDFAAATSPDA
LADAEMKLTAGMLDYARQAQSGRMHWSQVSADILYPEHPTDPAEVLAHVTTANDASAALD
GYNPPHKLYKELKAKLAELRGQGEGAAVQIADGPALVFKPGTKKQPAVAPEDSRVPQLRA
KLGVSENADDTHYDAKVSEAVRRFQEGAELKATGVLDDRTVKAINSPKRDRQIDTVIVNM
ERWRWLPRQLGASSVGNAYVILNIPDYTLKVMQNGAPIWTTRVVTGKPGQHATPLLTETM
KYITVNPTWNVPPSIVYNEYLPALQQDPTVLQRMGLRLEQNRDGSVHISQPPGEANALGR
IRFNFPNKFLVYQHDTPDKNLFAKEDRAFSHGCMRVQNPDQYASVLLNIEQPNDHYTPEK
IRSMYGSSEIDLKFATPIPVNITYQTAFVDDAGRLQIRKDVYGRDATMLSMLKGGRSKDL
ENVVAHSQPSYGGGGRPILPAGVSFASDNSSSGPSFFERLFGGGSPTPPAPIGRRQQPRR
VITR
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgactgttcgaagagccgtgctggatttgaccgcgtgctgatggccgtcgcggca
accttcctcacggtgaccgcgacctctgccctggcccaggatacgcctcgcgccagcgcc
gcagaactcgcgatcgatgcggcgatcccgcgtcccgaaccggcaaacgtcccgccgccc
accgcaagtgatttcaagatcgacgccaccgcgtccgtgccagacgccggcaaaacggca
gagcccaaagcgactgaagcgactgagaaggcgccagagacgaaaaccaccgagaagtca
gtcgagcccaaaccagccgaaaccgctaccgctcctgcgccagctcccaaagcaagcgac
accgcgaccgtaacgcccgcggccgctccggctgcgaccgctgtcgcgccggccgccgag
ccggccaaggagccggtgaaggctgccagcaatgtggcgccggaagatcagccggtcgcc
gacaaattgcgcgaaatgctgggcggaaaatcgctgcgctacttcgatcgcaaggccgag
cgcgccgccgtcgagaaattctatggcgcccgcgaatacgcgcccgtttggacccaggcc
ggcaaattgaccgacagcggcaagggcgtcgtcgcgcgcctgaaggatgccgccgccgac
ggcctcaattccgccgactacccggtgccggattttgccgccgcgacttcgccggacgcg
ctggccgacgccgagatgaaactgaccgccggcatgctggactatgcccgtcaggcccag
agcggccggatgcactggtcgcaggtctcggccgacatcctctatccggagcatccgacc
gatccggcggaagtgctggcgcatgtgacgacggccaatgacgcttccgccgcgctcgat
ggctataacccgccgcacaagctctacaaggaattgaaggccaagctcgccgaactgcgc
ggccagggcgaaggcgcggctgtccagatcgccgacggcccggcgcttgtcttcaagccc
ggtaccaagaagcagccggccgtggcgccggaagattcgcgcgtgccgcaactgcgggcc
aagctcggcgttagcgaaaacgctgatgacacgcattacgacgccaaggtctccgaggcc
gtgcgcagattccaggaaggcgccgaactgaaggcgaccggtgtcctggacgaccgtacc
gtcaaggcgatcaacagcccgaagcgcgacaggcagatcgacaccgtgatcgtcaacatg
gagcgctggcgctggctgccgcgccagctcggcgcgtcctcggtcggcaacgcctatgtc
atcctgaacatcccggactatacgctgaaggtgatgcagaacggcgcgccgatctggacc
acgcgtgtggtgaccggcaagccggggcagcacgccaccccgctgctgaccgagacgatg
aagtacatcacggtcaacccgacctggaacgtgccgccgtcgatcgtttacaacgaatat
ctgcctgccctgcagcaggacccgaccgtcctgcagcgtatgggactgaggctcgagcag
aatcgcgacggctcggtccacatctcgcagccgcccggcgaagccaatgcgctcggccgc
atccgcttcaacttcccgaacaagttcctggtctatcagcacgacaccccggacaagaat
ctgtttgccaaggaagatcgcgccttcagccatggctgcatgcgggtgcagaatccggat
caatacgcgtcggtgttgctgaacatcgagcagccgaacgaccattacacgccggagaag
atccgcagcatgtatggctcgagcgaaatcgacctgaaattcgcgacgccgatcccggtg
aacatcacctatcagaccgccttcgtggatgacgccggcaggctgcagatccgcaaggac
gtctacggccgcgatgccaccatgctgtcgatgctcaagggcggccgaagcaaggatctg
gaaaacgtggtagcgcattcgcagccgagctatggcggtggcggtcgtccgatcctgccg
gccggcgtcagcttcgccagcgacaacagctcttccggcccgtcgttcttcgagcggctg
ttcggcggcgggtcgccaacgcccccggctccgattggccggcgccaacagccgcggcgg
gtgatcacccgttaa
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