Bradyrhizobium sp. Ash2021: NL528_43445
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Entry
NL528_43445 CDS
T11004
Name
(GenBank) MBL fold metallo-hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
braa Bradyrhizobium sp. Ash2021
Pathway
braa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
braa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NL528_43445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
braa03019
]
NL528_43445
Messenger RNA biogenesis [BR:
braa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NL528_43445
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
RMMBL
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
WMT74646
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Position
9059153..9060724
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AA seq
523 aa
AA seq
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MILEHGSGQWSSKTGAGIEIEPVGPEVGQSDRRVPMHNERLVRLIGRQEGLADPEQILFG
LGIQGNVRTYACVHIHPTGFCVSERKGSEPGEMNRRNIAWVVAAIARERLPSAIFHPPHQ
VLIRTVRILLDLGLPLTAPDLASIPLPDVAGLTETSSSLLAIVLSHGHRDHWGLMPKVRP
DVPFVMGKITSQILKAASDFVPDTFSPEVSTFLEHRKTLEIGPFKLTPYLMDHSGFDAYA
ISVEADNQRLFYSGDFRAHGRKSKLFDALLHAPPRNVDLMLMEGSSLGRLDEHQQFPTEQ
ELEEVFVDRFKHTSGMALVACSAQNIDRVVSIYRACKRSGRVLLVDAYAAEILKAIDHDS
IPKPTSDWANIAVYLPQSQRRQLVRKGIASIVDSYRGLRIWPDELAAKSSNLTMLFRGWM
LGDLEKLDALQGARVIWSQWDGYLKDGPGKKLVETCTLKNIPFEVVHTSGHASPSDLKRL
ASAVGPRKLVPIHTFERDRFPALFENVSIHNDGEWIEVASGQI
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
ttgatcctcgaacatggcagcggtcaatggtcctccaaaacaggcgccggtatcgagatt
gagccggttggccctgaggtcgggcaatctgaccggcgtgtgcccatgcacaatgaacgc
ctcgtgcgtctcatcggacgacaggaagggctcgcggatccagagcagatcctcttcggt
ctgggcattcaggggaatgtcaggacgtacgcctgcgtgcacatacatccgaccggcttc
tgcgtgagcgagcggaagggatcggaaccaggcgagatgaaccgcaggaatatcgcatgg
gtcgtcgcagccatagctcgcgagcgtctgccgtccgccattttccatccacctcatcag
gtcctgatccgaacggtccggatcctgctggatcttggcctgccgctgaccgcacctgat
ttggcttcgataccgttgcctgatgtagccggccttaccgaaacatcttccagtctgctc
gcgatcgtgctgtctcacgggcatcgggaccattggggtctcatgccgaaggttagaccg
gatgtgccattcgtgatgggcaagatcacgtctcagatcctgaaggcggcttcagatttt
gtgcccgataccttcagtccggaagtttcgaccttcctcgaacatcgaaaaacgctcgaa
atcgggccgttcaagctaacgccctacctcatggaccattcaggattcgatgcatacgcg
atcagcgttgaggcggacaatcagcgactgttctactcaggggatttcagggcgcatggc
cggaagtccaaattgtttgacgctctcctccatgctccgccgcgcaatgtcgatctgatg
ctgatggagggatccagccttggacgccttgatgaacatcagcagtttccgaccgagcag
gagctcgaagaggtgttcgtggaccgcttcaagcacacttccggaatggcccttgttgca
tgctcggcgcaaaatatagaccgggttgtctccatatatcgagcctgcaagcgatccggg
cgggttcttctggtggacgcctatgctgctgaaattctcaaggcgatcgatcacgactcc
attccgaagccaacctcggactgggccaacatcgcggtctaccttccgcagtcgcagcgg
cgccagctggttcggaaaggcatcgcatcgattgtcgacagctatcggggcctccgaatc
tggcccgacgagctcgcggccaagtcgagcaatctgaccatgctgtttcgcggctggatg
ctaggcgatcttgaaaaactcgacgcgttgcagggcgctcgcgtcatttggtcccaatgg
gatggatacctcaaagacggccccggcaagaaactggtcgagacgtgcaccctgaaaaac
attccgtttgaggttgttcatacatcggggcacgccagtccctcggatttgaaacgcctc
gcatcggcggttggccccaggaaattggtgccaattcacacattcgagcgcgacaggttt
ccggccctgttcgagaacgtaagcattcacaacgatggcgaatggatagaggtagcaagt
ggccaaatttga
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