Bradyrhizobium sp. BWA-3-5: RX331_06575
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Entry
RX331_06575 CDS
T11384
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
brab Bradyrhizobium sp. BWA-3-5
Pathway
brab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
brab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RX331_06575 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brab03400
]
RX331_06575 (uvrB)
DNA repair and recombination proteins [BR:
brab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RX331_06575 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RX331_06575 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
Kinesin
Microtub_bd
DUF87
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
WOH67412
LinkDB
All DBs
Position
complement(1362971..1365889)
Genome browser
AA seq
972 aa
AA seq
DB search
MAKTPEVPKKPKTPKSKAHRPDVQPIGPALAELLNPALNRGDAGMGSGTGLQPPPDNSWD
RRAGGEAAAHRARASTKGMGDDVAKRDAGQGLEEAPQANYGTSATIPTLDPELARQLGLP
TAEDDEEALARPPRSKMESLGVKATAEALENLIRDGRPEFRKDDGSMKVWTPHRPPRPEK
SEGGVRFEIKSEYQPKGDQPQAIAELVEGINRNDRTQVLLGVTGSGKTYTMAKVIEATQR
PALILAPNKTLAAQLYGEFKNFFPDNAVEYFVSYYDYYQPEAYVPRTDTYIEKDSSINEQ
IDRMRHAATRALLERDDVIIVASVSCIYGIGSVETYTAMTFALKKGERIDQRQLIADLVA
LQYKRTQHDFTRGTFRVRGDIIDIFPAHYEDRAWRVNLFGDTVENIEEFDPLTGHKQDDL
EFIKIYANSHYVTPRPTLVQAIKSIKSELKQRLDELNNHGRLLEAQRLEQRTTFDLEMME
ATGSCAGIENYSRYLTGRRPGEPPPTLFEYVPDNALVFADESHVSIPQIGAMFRGDFRRK
ATLAEYGFRLPSCMDNRPLRFEEWDMMRPQTVAVSATPSGWELNESGGVFVEQVIRPTGL
IDPPVDIRPARTQVDDLVGEVRATAAAGYRSLITVLTKRMAEDLTEYLHEQGIRVRYMHS
DIDTIERIEIIRDLRLGAFDALVGINLLREGLDIPECALVAILDADKEGFLRSETSLIQT
IGRAARNVDGKVILYADQMTGSMERAIAETNRRREKQVEYNNANGITPESVKKSIGDILN
SVYERDHVLVEIGDGGMADDVISIGHNFEAVLSDLETRMREAAADLNFEEAARLRDEVKR
LRATEMAVVDDPTAKQRNVQKQAGAYAGTKKYGESANLPVSAMKKKGVQAALKSSRGSAS
STSKVHKPHLDEMHTPESLPYRPGGTKPRKPEFGSGSKIFQPTDSRQSGPEFGPAPRSSG
GAPGHRGGWKKR
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagacccccgaagttcccaaaaagccaaagacccccaaatccaaggcgcaccgc
cccgacgttcagccgatcgggcctgcgctcgcggaactgctcaatcctgcgctcaaccgc
ggcgatgccggcatgggctcgggcaccggcctgcagccgccgccggacaattcctgggac
cgccgcgccggcggcgaggcggccgcgcatcgcgcgcgcgcttcgaccaaggggatgggc
gacgatgtcgccaaacgcgacgccggacaggggctcgaagaagccccgcaggccaattac
ggcacctcggccaccatcccgaccctcgaccctgaactggcgcgccagctcggcctgccg
acggcggaggacgacgaggaggccctcgcccgcccgccgcgcagcaagatggaatcgctc
ggcgtcaaggcgaccgcggaggccttggaaaacctgatccgcgacggccgtcccgaattc
cgcaaggacgacggctcgatgaaggtgtggacaccgcaccggccgccgcgcccggaaaaa
tccgaaggcggcgtgcgcttcgagatcaaatccgaataccagccgaagggcgaccagccg
caggcgatcgccgagctcgtcgagggcatcaaccgcaacgaccgcacccaggtgctgctc
ggcgtcaccggctcgggcaagacctacaccatggccaaggtgatcgaggcgacgcagcgc
ccggccctgattctggcgccgaacaagacgctggccgctcagctctatggcgagttcaag
aatttctttcccgacaacgcggtggagtatttcgtctcctactacgactactatcagccg
gaagcctacgtcccgcgcaccgacacctatatcgagaaagactcctccatcaacgagcag
atcgaccgcatgcgccacgcggcaacccgcgcgctgctcgagcgcgacgacgtcatcatc
gtagcctccgtgtcgtgcatctacggtatcggctcggtcgagacctataccgcgatgacg
tttgcgctgaagaagggcgagcgcatcgaccagcggcaactgatcgccgacctcgtcgcg
ctgcagtacaagcgcacccagcacgactttacccgcggcaccttccgggttcgcggcgac
atcatcgacatcttcccggcgcactatgaggaccgtgcctggcgcgtgaacctgttcggc
gataccgtggaaaatatcgaggagttcgatccgctcaccggccacaagcaggacgatctc
gaattcatcaagatctacgccaactcgcactatgtgacgccgcgcccgacgctggtgcag
gcgatcaagtcgatcaaatcggaattgaagcagcggctcgacgagctcaacaaccacggc
cgcctgctggaagcgcagcggctggagcagcgcaccaccttcgatctcgagatgatggag
gcgacgggaagctgcgccggcatcgagaactattcgcgctacctcaccggacggcgtccc
ggcgagccgccgccgacgctgttcgaatacgtccccgacaacgcgctggtgttcgccgac
gaaagccatgtcagcattccgcagatcggcgccatgttccgcggcgacttccgccgcaag
gcaacgctcgccgaatatggcttccgcctgccctcctgcatggacaatcggccgctgcgc
ttcgaggaatgggacatgatgcgcccgcagacggtcgcggtgtcggcgacgccgagcggc
tgggagctgaacgaaagcggcggcgtgttcgtcgagcaggtcatccgcccgaccgggctg
atcgatcccccggtcgacatccgtcccgcgcgcacgcaggtcgacgatctcgtcggcgag
gtccgcgccaccgccgccgccggctaccgctcgctgatcacggtgctgaccaagcgcatg
gcggaggacctgaccgaatatctgcacgagcagggcatccgcgtccgctacatgcactcc
gatatcgacacgatcgagcgcatcgagatcatccgggatcttcgcctcggcgcgttcgac
gcgctggtcggcatcaacctgctgcgcgaaggcctcgacattcccgaatgcgcgctggtc
gcgatcctggatgccgacaaggaaggctttttgcgcagcgagacctcgctgatccagacc
atcggccgcgccgcgcgcaacgtcgacggcaaggtgatcctctacgccgatcaaatgacc
ggctcgatggagcgggcgattgccgaaaccaaccgccgccgcgagaagcaggtcgaatac
aacaacgccaacggcatcacgccggagagcgtgaagaaatcgatcggcgacatcctcaac
tccgtctacgagcgcgaccacgtgctggtcgagatcggcgacggcggcatggcggatgac
gtcatctcgatcggccacaatttcgaagctgtgctctccgacctcgaaacccgcatgcgc
gaagccgccgccgacctgaacttcgaggaagccgcaaggctgcgcgacgaagtcaaacgc
ctccgcgccacggagatggccgtcgtcgacgaccccaccgccaagcagcgcaacgtgcag
aagcaggccggtgcctatgccggcaccaagaagtacggcgaatcagccaatctcccggtc
agcgcgatgaagaagaaaggcgtgcaggccgccctgaaatccagtcgcggcagcgctagc
agcacctccaaagtccacaaaccccatctcgacgaaatgcacaccccggaatccctgccc
taccgccccggcggcaccaaaccgcgcaagcccgagttcggcagcggcagcaaaatcttc
cagccgacggactcgcggcagtcgggcccggagttcgggccagcgccgcgctcaagcggc
ggtgcgccggggcatcggggtgggtggaagaagcggtag
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