KEGG   Bradyrhizobium sp. BWA-3-5: RX331_12040
Entry
RX331_12040       CDS       T11384                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
brab  Bradyrhizobium sp. BWA-3-5
Pathway
brab03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:brab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    RX331_12040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:brab03400]
    RX331_12040
DNA repair and recombination proteins [BR:brab03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     RX331_12040
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: WOH68403
LinkDB
Position
complement(2534107..2535075)
AA seq 322 aa
MAPRANWKGFLRLSLVTCPVALYPATSDTEKVSFNQINRKTGHRIKYSKVDAETGEEVAN
EDIMKGYKVDTDTYIEVSKDELDDIALESTRTIEIDEFVPRTDIDSRYVIRPYYLVPDGK
VGHDAFAVIRETIRNMDKVAIGRVVLTNREHIIALEPLDKGLMGTLLRYPYEVRSEKEYF
EDIQDVKITKDMLDLAKHIVEQKSASFEPEQFEDRYEQALIDLINQKRNGLSTKTKAAPK
TSGNVINLMDALKRSLASETQAAPAPAAKAKGKKPKKAAAGQREMLLPISGSGKRAAKET
AKEAPKRAEKPVRTAGRAKKAG
NT seq 969 nt   +upstreamnt  +downstreamnt
atggccccccgcgccaattggaagggttttctgcgcctctcgctggtgacctgcccggtc
gccctctatccggcgacgtcggataccgagaaggtctcgtttaaccagatcaaccgcaag
accggccatcgcatcaaatattcgaaggtcgacgccgagaccggcgaggaagtggccaac
gaagacatcatgaaaggctacaaggtcgacaccgatacctacatcgaggtgtcgaaggac
gagcttgacgacatcgcattggaatcgacccgcaccatcgagatcgacgagttcgtcccg
cggaccgacatcgacagccgctacgtcatccgcccctattatctcgtgccggacggcaag
gtcggccacgacgcattcgctgtcatccgcgagaccatccgtaacatggacaaggtcgcg
atcggccgcgtggtgctgaccaaccgcgaacacatcatcgcgctggagccgctcgacaaa
ggattgatgggaacgctgctgcgctatccctatgaagtgcgtagcgagaaggaatatttc
gaagacatccaggacgtgaagatcacaaaggatatgcttgatcttgcaaagcatatcgtc
gagcagaagtccgcatcattcgagccggagcagttcgaggaccgctacgagcaggcactg
atcgacctgatcaatcagaagcgcaacgggctcagcaccaagaccaaggcggcgccgaag
acttccggcaacgtcatcaatctgatggacgcgctcaagcgcagcctcgccagcgaaacg
caggccgcccctgcccccgccgccaaggcgaagggcaagaagccgaagaaggccgccgcc
ggccagcgcgagatgctgttgccgatcagcggcagcggcaagcgcgccgccaaggagacg
gcgaaagaagcgcccaagagggcggaaaagccggtgcgcaccgccggccgcgccaagaag
gccggatga

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