Bradyrhizobium sp. BWA-3-5: RX331_15360
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Entry
RX331_15360 CDS
T11384
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
brab Bradyrhizobium sp. BWA-3-5
Pathway
brab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
brab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RX331_15360 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brab03021
]
RX331_15360 (rpoB)
03400 DNA repair and recombination proteins [BR:
brab03400
]
RX331_15360 (rpoB)
Enzymes [BR:
brab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RX331_15360 (rpoB)
Transcription machinery [BR:
brab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RX331_15360 (rpoB)
DNA repair and recombination proteins [BR:
brab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RX331_15360 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
WOH68987
LinkDB
All DBs
Position
3215341..3219459
Genome browser
AA seq
1372 aa
AA seq
DB search
MAQQTFTGRKRVRKFFGHIKEVAEMPNLIEVQKASYDQFLMVDEPQGGRLDEGLQAVFRS
VFPISDFSGTSMLEFVRYEFEPPKYDVDECRQRGMTYAAPLKVTLRLIVFDIDEETGAKS
VKDIKEQDVYMGDIPLMTMNGTFVVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFA
ARVIPYRGSWLDIEFDAKDIVFARIDRRRKIPVTSLMYALGLDGEQILSTFYKKINYKRA
KDGWRVPFDANRFRGYSTVNDLIDADSGKVVLEAGKKLTVRAARQLQEKGLKALRMSDEE
LVGNYVAEDLVNPKTGEIHAEAGEEITDKLLKALNEQGYKELPLLDIDHVNVGAYIRNTL
NADKNMTREDALFDIYRVMRPGEPPTLDSAQAMFQSLFFDAERYDLSAVGRVKMNMRLEL
DAPDTHRTLRKEDILAVIKTLVDLRDGKGEIDDIDHLGNRRVRSVGELMENQYRIGLLRM
ERAIKERMSSVDIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLS
ALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFVETPY
RKVKDGRVTDEVVYLSAMEEGRYRVAQANVPLDAKGRFTEDLIVCRHAGEVLPITPDKVD
YMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEGVVARD
SGAAIAARRSGVIDQIDATRVVIRATEDLDPTKSGVDIYRLMKYQRSNQSTCINQRPLVK
VGDIVKKGDIIADGPSTDLGELALGRNVLVAFMPWNGYNFEDSILLSERIVKDDVFTSIH
IEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVRAGDILVGKITPKGE
SPMTPEEKLLRAIFGEKASDVRDTSLRVPPGVQGTIVEVRVFNRHGVDKDERALAIEREE
IERLAKDRDDEQAILDRNVYGRLADLLENRQGIAGPKGFKKDTKITRAVLEEYPKSQWWM
FASPNDKLMAEIEAMRKQYDESKKGLEQRFLDKVEKLQRGDELPPGVMKMVKVFVAVKRK
IQPGDKMAGRHGNKGVVSKIVPIEDMPFLEDGTHADIVLNPLGVPSRMNVGQILETHLGW
ACAGLGKRIGQTIDGYYQKQDLKPLRETLKKIYGDDETIKSLNDNELMELGKNLSHGVPI
ATPVFDGAKEADIEEMLKLAGFDASGQSTVYDGRTGDAFDRKVTVGYIYMLKLHHLVDDK
IHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRT
KVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVDLHNSKMGPAPTSEAAE
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagacattcaccggtcgcaaacgcgttcgcaagttcttcggacacatcaag
gaagtcgccgagatgccgaatctcatcgaggttcagaaggcatcgtatgaccagttcctg
atggtcgacgaaccgcaaggcggccggctggacgagggcctgcaggcggtgttccgctcg
gtgttcccgatctcggatttctcgggcacctcgatgctcgaattcgtccgctacgagttc
gagccgccgaaatatgacgtcgacgagtgccgccagcgcggcatgacctatgctgcgccg
ctcaaggtgacactgcgcctgatcgtgtttgatatcgacgaggaaaccggcgccaagtcg
gtcaaggacatcaaggagcaggacgtctacatgggcgatatcccgctcatgacgatgaac
ggcaccttcgtcgtcaacggcaccgagcgcgtcatcgtctcgcagatgcaccgttcgccc
ggcgtgttctttgaccacgacaagggcaagacccattcgtcaggcaagctgttgtttgcc
gcgcgcgtgattccgtatcgtggttcctggctcgacatcgagttcgacgccaaggacatc
gtgttcgcgcgcatcgaccgccgccgcaagattcccgtgacctcgctgatgtacgcgctc
ggtctcgacggcgagcagatcctttcgaccttctacaagaagatcaactacaagcgcgcc
aaggacggctggcgtgtgccgttcgacgccaaccgtttccgcggctattccacggtcaac
gatttgatcgacgccgacagcggcaaggtcgtgctcgaggccggcaagaagctcaccgtc
cgcgccgcccgccagctccaggagaaggggctgaaggcgcttcgcatgtcggatgaggag
ctggtcggcaactacgtcgccgaggacctcgtcaatccgaagaccggcgaaatccacgcg
gaagccggtgaagagatcactgacaagctgctgaaggcgctcaacgagcagggctacaag
gagctgccgctgctcgacatcgaccacgtcaatgtcggcgcctacatccgcaacacgctg
aatgccgacaagaacatgacgcgtgaggacgcgctgttcgacatctaccgggtgatgcgt
ccaggcgagccgccgacgctcgactcggcgcaagccatgttccagtcgctgttcttcgac
gccgagcgttacgacttgtccgcggtcggccgcgtcaagatgaacatgcgcctcgagctc
gatgcgcccgacacccaccgtacgctgcgcaaggaagacatcctggccgtcatcaagacg
ctggtcgacctgcgcgacggcaagggcgagatcgacgacatcgaccacctcggcaaccgc
cgtgtgcgctcggtcggcgagctcatggagaaccagtaccgcatcggtctcttgcgcatg
gagcgcgccatcaaggagcgcatgtcgagcgtcgacatcgataccgtgatgccgcaggac
ctgatcaacgcgaaacccgccgcggcggccgtgcgcgaattcttcggctcctcgcagctc
tcgcagttcatggaccagaccaacccgctgtcggagatcacccacaagcggcgcctgtcg
gcgcttggcccgggcggtctgacccgcgagcgcgccggcttcgaggtgcgcgacgtgcac
ccgacgcattacggccgcatctgcccgatcgagacgccggaaggtccgaacatcggcctg
atcaactcgctggcgacgttcgcgcgcgtcaacaagtacggtttcgtcgagactccctat
cgcaaggtgaaggacggccgcgtcacggacgaggtcgtgtatctctcggcgatggaggag
ggccgttatcgcgtcgcgcaggccaacgtgccgctcgatgccaagggccgcttcaccgaa
gacctgatcgtctgccgtcacgccggcgaagtgctgccgatcacgcccgacaaggtcgac
tacatggacgtgtcgccgaagcagctcgtttcggtcgccgcagctctgatcccgttcctc
gagaacgacgacgccaaccgcgcgctgatgggctcgaacatgcagcgccaggcggtgccg
ctggttcgcgccgaggcgccgttcgtcggcaccggcatggaaggcgtggtggcgagggac
tccggcgcggcgatcgccgcacggcgctcgggcgtgatcgaccagatcgacgccacccgc
gtcgtgatccgcgccaccgaggatctcgatcccaccaagtcgggcgtcgatatctaccgg
ctgatgaagtaccagcgctccaaccagtcgacctgcatcaaccagcgtccgctggtgaag
gtcggcgacatcgtcaagaagggcgacatcatcgccgacggtccctcgaccgatctcggc
gagctcgcgctcggccgcaacgtgctggtcgcgttcatgccgtggaacggctacaacttc
gaagactcgatcctgctctccgagcggatcgtgaaggacgacgtcttcacctcgatccat
atcgaggagttcgaggtgatggcccgtgacaccaagctcggacctgaggaaatcacccgc
gacattccgaacgtctcggaagaagcgctgaagaacctcgacgaagccggcatcgtctat
atcggtgcggaagtccgcgccggcgacatcctggtcggcaagatcacgccgaagggcgaa
agcccgatgacgccggaggaaaagctcctgcgcgccatcttcggcgaaaaggcctccgac
gtccgcgatacctcgctccgcgtgcctccgggtgtgcagggcacgatcgtggaagtgcgc
gtgttcaatcgtcacggcgtcgacaaggacgagcgtgcgctggcgatcgagcgcgaggag
atcgagcgtctggccaaggaccgcgacgacgagcaggcgattctcgaccgtaacgtctac
ggccgccttgctgacctgttggaaaaccgccagggcatcgccggtccgaagggcttcaag
aaggacaccaagatcacgcgcgccgtgctcgaggagtacccgaagtcgcagtggtggatg
tttgcctcgccgaacgacaagctgatggccgaaatcgaggcgatgcgtaagcagtacgac
gagtcgaagaagggcctcgaacagcgcttcctcgacaaggtcgaaaagctgcagcgcggc
gacgagctgccgcccggcgtgatgaagatggtcaaggtcttcgtcgcggtgaagcgcaag
atccagcccggcgacaagatggccggccgccatggcaacaagggcgtggtgtccaagatc
gtgccgatcgaggacatgccgttcctcgaggacggcacgcacgcggacatcgtgctcaat
ccgctcggcgtgccctcgcgcatgaacgtcggccagattctggagacgcatctcggctgg
gcctgtgccggtctcggcaagcgcatcggccagaccatcgacggctactatcagaagcag
gatctcaagccgctgcgcgagaccctgaagaagatctatggcgacgatgaaactatcaag
tcgttgaacgacaacgagctgatggagcttggcaagaacctgagccacggcgtgccgatc
gccaccccggtgttcgacggcgccaaggaagccgacatcgaggagatgctcaagctcgcg
ggcttcgacgcctccggccagtcgaccgtctatgacggccgcaccggcgatgccttcgat
cgcaaggtgacggtcggctacatctacatgctcaagctgcaccatctggtggacgacaag
atccatgcgcgttcgatcggtccgtactcgctcgttacccagcagccgctgggcggcaag
gcgcagttcggcggccagcgcttcggcgaaatggaggtgtgggcgctggaagcttacggc
gcggcctacacgctgcaggaaatgctgaccgtgaagtcggacgacgtcgccggccgtacc
aaggtgtacgaggcgatcgtgcgcggcgacgacacgttcgaggcgggtattccggaatcg
ttcaacgtgctggtcaaggaaatgcgctcgctcggcctcaacgtcgacctgcacaattcc
aagatgggaccggcaccgacatcagaggcagccgagtaa
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integrated database retrieval system
