Bradyrhizobium sp. BWA-3-5: RX331_17650
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Entry
RX331_17650 CDS
T11384
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
brab Bradyrhizobium sp. BWA-3-5
Pathway
brab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RX331_17650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brab03019
]
RX331_17650
Messenger RNA biogenesis [BR:
brab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RX331_17650
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NCBI-ProteinID:
WOH69408
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Position
3652577..3654247
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AA seq
556 aa
AA seq
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MARPDELTFAPLGGVGEIGMNLSIYGLGNRHQRSWLAVDLGVSFGDEEHLPGIDLIMPDI
GFLEKERDNLMGLVLTHAHEDHFGAIIDLWPKLQCKVYATKFSAALFEAKCAAERNPPKI
PVTVVPSGGRINLGPFTVEFIPVAHSIPESHALAIHTSAGTVLHTGDWKIDPTPLIGLPT
DERRLRELGDEGVLALVGDSTNAVRDGRSPSETEVAATIKKLVGAAKGRVAVTTFASNVA
RVKAVADAARDAGREVVVVGRAMERVVQVARETGYLDGVQNFRGADYYGHFPPDKVLALC
TGSQGEPRAALARIANDDHPQVTLNKGDSVIFSSRTIPGNEKAVGAIINGLVAQGIEVIT
DRTDLVHVSGHPRRDELRDMISWVRPQLLIPVHGEALHLSEHAKLARAAGVPKVLTCRNG
DLVKLGPGEPGIIDELPSGRLYKDGAILEDSRSRAVVERRRMGFAGCAFVAIAMTDKGEL
ADDPEVDLVGIPEKNAAGEIIDEIVFDTVVSTVESLPRPRRRDPDATSESVRRAVRAVIN
EHWGKKPICLVHVLVV
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggccggatgaactaacatttgccccgcttggcggcgtcggcgagatcggcatg
aacctgtcgatctatggcctcggcaaccgccaccagcgctcctggctggcggtcgatctc
ggtgtctccttcggcgacgaggagcatctgccgggcatcgacctgatcatgcccgacatc
ggtttcctggaaaaggaacgcgacaacctgatgggcctggtgctgacgcacgcccatgag
gatcatttcggcgccatcatcgacctctggccgaagctgcagtgcaaggtctacgcgacc
aagttcagcgccgccctgttcgaggccaaatgcgccgccgagcgcaatccgcccaaaatt
ccggtcacggtggtgccctcaggcggccggatcaatctcggccccttcaccgtcgaattc
atcccggtcgcgcactcgatcccggaatcgcatgcgctggcgatccacacctccgccggc
accgtgctgcataccggcgactggaagatcgatccaacaccgctaatcggacttccgacc
gacgagcggcgcttgcgcgagctcggcgacgagggcgtgctggcgctggtcggcgattcc
accaatgcggtgcgagacgggcgctcgccctcggagaccgaggtcgccgccaccatcaag
aagctggttggcgccgccaagggccgcgtcgccgtcaccacctttgcctcgaatgtcgcg
cgggtgaaggcggtggcggatgccgcccgggacgccggccgcgaggtggtcgtggtcggt
cgcgccatggagcgcgtggtgcaggtcgcccgcgaaaccggctatctcgacggcgtgcag
aatttccgcggcgccgactattacggccacttcccgccggacaaggtgctggcgctgtgc
acggggagccagggcgagccgcgcgcggcgctggcgcgcattgccaacgacgaccatccg
caggtgacgctgaacaagggcgacagcgtgatcttttcgtcgcgcaccatccccggcaat
gagaaggcggtcggcgccatcatcaacgggctggtggcgcagggcatcgaggtcatcacc
gaccgtaccgatctcgtccatgtctccggccatccgcgccgcgacgaattgcgcgacatg
atctcctgggtgcggccgcagctcctgatccccgtccatggcgaggcgctgcatctatcg
gagcacgccaagctggcgcgcgcggccggcgtgcctaaagtgctgacctgccgcaacggc
gatctggtcaagctcgggcccggcgagcccggcatcatcgacgaattgccgtcgggacgg
ctctacaaggacggcgccatcctggaggattcaagatcccgcgccgtggtcgagcggcgg
cggatgggatttgccggctgcgccttcgtcgccatcgccatgaccgacaagggcgagctc
gccgacgatcctgaggtcgatctggtcggcatccccgagaagaacgcggccggcgagatc
atcgacgagatcgtgttcgacacggtggtctcgacggtggagagtctgccgcggccgcgg
cggcgcgacccggatgcgacatcggaatcggtgcgccgcgcggtgcgggctgtgatcaac
gagcactggggcaagaagccgatttgcctcgttcatgttctggtggtttga
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