Bradyrhizobium sp. BWA-3-5: RX331_18215
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Entry
RX331_18215 CDS
T11384
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
brab Bradyrhizobium sp. BWA-3-5
Pathway
brab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
brab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RX331_18215 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brab03400
]
RX331_18215 (xth)
Enzymes [BR:
brab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RX331_18215 (xth)
DNA repair and recombination proteins [BR:
brab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RX331_18215 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
WOH69516
LinkDB
All DBs
Position
complement(3773293..3774084)
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AA seq
263 aa
AA seq
DB search
MRVATWNVNSIRQRLEHLLTWLKEGSPDIVCLQEIKCTDEAFPRLEIEALGYNVVTHGQK
TFNGVALLSKLPFDETKSGLAGDDEDAHARFLEGVVTLKTGVMRIACLYLPNGNPPNTDK
YPYKLKWMSRLLEYSKERLKGEEPLVLAGDFNVIPSASDVYNPAAWTNDALFRPETREAF
QALLGLGLTDALRAVTDEPKLYTFWDYQAGAWQKNWGLRIDHLLLSPQASDRLANVGIDS
YVRAWEKPSDHVPVWADFDLETA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgccacctggaacgtcaattcaatccggcagcggctcgagcacctcctgacc
tggctcaaggagggctcgccggacatcgtctgcctgcaggaaatcaaatgcacggacgaa
gcattcccgcggctcgaaatcgaggcgctcggctataacgtcgtcacccacggccaaaaa
accttcaacggcgtggcgcttttgtccaaactgccgttcgacgagaccaagtcggggctg
gccggcgacgacgaggacgcccacgccaggttcctcgaaggcgtggtgacgctgaagacc
ggcgtgatgcgcatcgcctgcctctatctgcccaacggaaatcctcccaatacagacaaa
tacccttataaactcaaatggatgtcgcggcttcttgagtattcgaaggagcgccttaaa
ggggaagagccgctggtccttgccggcgacttcaacgtcatcccgtctgcttcggacgtc
tataaccccgccgcctggaccaatgacgcgctattccggcccgagacccgcgaggccttt
caggcgctgcttgggcttgggctgacggacgcgctgcgcgcggtgactgatgaaccgaag
ctctacacgttctgggactatcaggccggcgcttggcagaagaactgggggctgcgcatc
gatcatctcctgctgtcgccgcaggccagcgaccgcctcgccaatgtcggcatcgacagc
tacgtccgcgcctgggagaagccgtccgaccacgtcccggtgtgggcggatttcgatctg
gaaacggcatag
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