Bradyrhizobium sp. BWA-3-5: RX331_20185
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Entry
RX331_20185 CDS
T11384
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
brab Bradyrhizobium sp. BWA-3-5
Pathway
brab03410
Base excision repair
brab03430
Mismatch repair
brab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RX331_20185 (recJ)
03430 Mismatch repair
RX331_20185 (recJ)
03440 Homologous recombination
RX331_20185 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brab03400
]
RX331_20185 (recJ)
DNA repair and recombination proteins [BR:
brab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
RX331_20185 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RX331_20185 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RX331_20185 (recJ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WOH69884
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Position
complement(4165896..4167737)
Genome browser
AA seq
613 aa
AA seq
DB search
MMTPASALPVEPPPAFLGVQRSATGKLWRDRLDARGAARALAITQRYQLPEMLARVLAGR
DVGIDEVQDYLDPTIRKLMPDPHTVTQMETAAKRIADAAQRGEKVAIFGDYDVDGATSAA
LLAWHLRHCGLDPLIHIPDRIFEGYGPNTEAVRALAGRGATLLITVDCGTTSLEPLAEAR
KLGMSVVVIDHHQCGEELPEVDALVNPNRLDDLSGLGHLAAVGLVLITLVAVNRELRGRS
FWNAERPEPDLLGMLHHVALGTVADVAPLTGLNRAFVAKGLIAMRRRDHVGHTALMDVAR
LNGPPEAWHLGFMLGPRINAGGRIGRADLGVRLLLEGDVSEAARIAAELDRLNSERRVIE
QAAEAQAEAEALASLGLEDKGAVIVTAAEGWHPGIVGLVASRLKEKFARPAFAIALEPGG
IGTGSGRSISGVDLGKAVRQAVKDRILMKGGGHAMAAGVTLRKEKLAEFRAFMENALAED
VANSRHENELFIDGAISARGVTVEFANMLNRAGPFGAANPEPVIALPAHQLVYADEVGQA
HLRVRFKAGDGAIVNGIAFRAIGQKLGHALTQNRGQPLHVAGSLAVDRFQGAERVQLRVV
DVAVPDPGPKVIR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atcatgacgcccgcatccgctttgcccgttgaaccgccgccggcctttctgggcgttcag
cgttcggcaaccggcaaattgtggcgcgaccggctcgacgcgcggggcgcggcgcgcgcg
ctggcgatcacccagcgctaccagttgccagaaatgctggcgcgggtcttggcggggcgc
gatgtcgggatcgacgaggttcaggactacctcgatccgaccattcgcaagctgatgccc
gacccccacaccgtgacgcagatggagacggcggccaagcggatcgcggatgccgcccag
cgcggcgagaaggtcgccatcttcggcgattacgatgtcgacggcgcgacatcggcggcg
ctgctcgcctggcacttgcgccattgcgggctcgacccgctgatccatatccccgaccgc
atcttcgagggctacggccccaataccgaggcggtgagggcgctcgccggcagaggcgcg
acgttgctgataacagtcgattgtggcaccaccagcctcgagccgctggcggaagcgcgc
aagctcgggatgtcggtcgtcgtcatcgaccatcaccaatgcggggaggaactgcctgag
gtcgatgcgctggtaaatccgaaccggctcgacgatctctccggcctcggtcatctcgcc
gcggtcgggctggtgctgatcacactggttgcggtgaaccgggaactgcgcgggcgcagc
ttctggaacgccgagcggccggagccggatctgctcggcatgctgcaccatgtggcgctc
ggcaccgtggccgacgtcgcgccgctaaccgggctgaaccgcgccttcgtcgcaaaaggc
ctgatcgcgatgcgccggcgcgaccatgtcggccataccgcgctgatggatgtggcgcgg
ttgaacgggccgccggaggcctggcatctcggcttcatgctggggccgcgcatcaatgcc
ggcggacggatcgggcgcgccgatctcggcgtgcggctgctcctggaaggcgacgtttcg
gaagcggcgcggatcgcggccgagctcgaccgcctcaacagcgagcgccgcgtcatcgag
caggcggccgaagcgcaggcggaggccgaggcactggcctcgctcgggctggaggacaag
ggcgctgtcatcgtgacggccgccgaaggctggcatcccggcatcgtcggcctggtcgcc
tcgcggctgaaggagaaattcgcgcggccggcctttgccattgcgctggagccgggcggc
atcggcaccggctccggtcgttcgatctcaggcgtcgatctcggcaaggcggtgcgccag
gcggtcaaggatcgtatcctgatgaagggcggcggccacgccatggccgccggcgtcacg
ctgcggaaggagaagctcgccgaattccgcgccttcatggagaacgcgctggccgaggat
gtcgccaattcccgtcacgagaacgagctgttcatcgacggtgccattagcgcgcggggc
gtgacggtggagttcgccaatatgctgaaccgcgccggaccgttcggggcggccaatccg
gagccggtgatcgcgctgccggcgcatcagctcgtctatgcggacgaggtcgggcaggcg
catctgcgcgtccgcttcaaggcgggcgacggcgccatcgtcaacggcatcgcgttccgc
gcgatcgggcagaagctcggccatgcgctgacgcagaaccgcggccagcccctgcatgtc
gcaggatcgcttgcggtcgatcgctttcagggggcggagcgtgtgcagctgcgcgtggtc
gacgtcgcggtgccggaccccgggccgaaagtcatcaggtaa
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