Brachybacterium sp. GU-2: RBL05_01805
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Entry
RBL05_01805 CDS
T10376
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
brac Brachybacterium sp. GU-2
Pathway
brac03030
DNA replication
brac03430
Mismatch repair
brac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RBL05_01805
03430 Mismatch repair
RBL05_01805
03440 Homologous recombination
RBL05_01805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brac03032
]
RBL05_01805
03400 DNA repair and recombination proteins [BR:
brac03400
]
RBL05_01805
Enzymes [BR:
brac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RBL05_01805
DNA replication proteins [BR:
brac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RBL05_01805
DNA repair and recombination proteins [BR:
brac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RBL05_01805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WME24697
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All DBs
Position
complement(1391856..1392566)
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AA seq
236 aa
AA seq
DB search
MSTPSWIDAPLLGFDTETTGTNVERDRIVTVALVHSVGPGRENETVATWLIDPGVEIPEP
AQRVHGISTEHAREHGMQPAEALDEVAGMIVEALGKDVPLVAFNIGFDLAILENELTRLG
LPTLVQRLGHDIAPVIDGLVIDRGVDRYRKGKRTLTDVLAHYGLEQDGRLHTADVDVSAT
LDVVRAIAAKHPQVASSTLEELHREQVGWHGRWAEGMNEWLTKKGRTPDVTTAWPL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccccttcctggatcgacgccccgctgctgggcttcgacaccgagaccaccggc
acgaacgtcgagcgggaccgtatcgtcacggtcgcgctcgtgcactccgtcggccccggc
cgcgagaacgagaccgtcgcgacctggctgatcgacccgggggtcgagatccccgagccc
gcccagcgcgtgcacgggatcagcaccgagcacgcccgcgagcacggcatgcagcccgcc
gaggcgctcgacgaggtcgcgggcatgatcgtcgaggcactcgggaaggacgtgccgctg
gtcgccttcaacatcggcttcgacctggcgatcctcgagaacgagctgacccgcctgggc
ctgcccacgctcgtccagcggctcggccacgacatcgcgcccgtgatcgacgggctcgtc
atcgaccgcggcgtggatcgctaccgcaagggcaagcgcaccctcaccgacgtcctcgcc
cactacggcctcgagcaggacggccgcctccacaccgccgacgtcgacgtctccgccacg
ctggacgtggtccgcgcgatcgccgcgaagcacccgcaggtcgcctcctccaccctcgag
gagctccaccgcgagcaggtgggctggcatggccgctgggccgagggcatgaacgagtgg
ctcacgaagaagggcaggaccccggacgtgaccaccgcctggccgctgtga
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