Brachybacterium sp. GU-2: RBL05_01970
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Entry
RBL05_01970 CDS
T10376
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
brac Brachybacterium sp. GU-2
Pathway
brac03420
Nucleotide excision repair
brac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
brac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RBL05_01970
03430 Mismatch repair
RBL05_01970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brac03400
]
RBL05_01970
Enzymes [BR:
brac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RBL05_01970
DNA repair and recombination proteins [BR:
brac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RBL05_01970
MMR (mismatch excision repair)
Other MMR factors
RBL05_01970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
ResIII
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WME23540
LinkDB
All DBs
Position
complement(1356565..1359432)
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AA seq
955 aa
AA seq
DB search
MSSLFDDLSLPDAFRRLDGVQVTPSALPSRAAADDDARADGRTDGEEMHREEEAPDLLDR
EPPPEHEEPPYEEEPPYEDEPPREEPAPVAAPPAPAPSRRRVPADSPALAELVDGLNPAQ
REAVEHRGSPLLIVAGAGSGKTRVLTRRIAHLLRAGEALPGEILAITFTNKAAAEMRERV
EELIGPAARSMWVSTFHSACVRILRRDAAAAGLKSSFTIYDSADSLRLITTIAKDLQLDT
KKHAPRALASRISTLKNDLVDPIDFADQAESAKNPFEKTLAKIFTNYTERLRQANAVDFD
DLIGLTVALLRENPAIREGYRRRFRHLLVDEYQDTNTAQYQLVRELVGEDPRADLTVVGD
SDQSIYAFRGATIRNIIEFEQDFPSARTIVLEQNYRSTQNILTAANAVIEENQGRRKKNL
WTDQGEGEQITLYVADDEQSEARYIGRQIDALVDDGRRAGDIAIFYRANAQSRALEDQLI
RVGLPYRVVGGTRFYERREIKDAIAYLQVLANPADEINLRRILNVPKRGIGDRAEAAIAM
LAERDRISFGEALRRAEEAPGIATRSLNAVRTFVAMLEDLQAMAERGDGPAELLEAILTR
SGYYAELQGSDDPQDESRLENLAELISVAAEFEAQMEELDALASEMEDEEGDAAAAGGTE
GAAEAEEDAAAEGTADAAAAGSADAVAEATGAVVAGAAPVSDPVGADIAPDAALTAPDDP
EASLVDRFLEKVSLVADADQLPGEEDQFVTLMTLHTAKGLEFPVVFLTGMEDGTFPHNRT
LQDPDELEEERRLAYVGITRAREKLYLTRAQMRSMWGQSQYMPASRFLDEVPEEVLDVAR
AGSTLGGAGFGGGSFSGGSGFGGGRGGGRGPSFSGGVGGGRSDVKRPSFGSGRTATPTDK
LPQLAVGDRVTHDSFGMGTVAEVSGQGDKTQVEVQFRDPHGRKRLLLRYAPLTKL
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgagctcactcttcgacgacctctcgctgcccgacgccttccgccgcctggacggcgtg
caggtgacgccctcggccctgccctcccgggccgcggccgacgacgacgctcgcgccgac
ggacgcaccgacggcgaggagatgcaccgcgaggaggaggccccggacctgctcgaccgc
gagccgccgcccgagcacgaggagcccccgtacgaggaggagccgccctacgaggacgag
ccgccgcgggaggagcccgcgcccgtcgccgccccgcccgccccggcgccgtcccgtcgt
cgggtcccggcggactcacccgccctcgccgagctcgtcgacggcctgaaccccgcccag
cgcgaggcggtcgagcaccggggcagcccgctgctgatcgtcgccggcgccggctccggc
aagacccgcgtgctcacccgccgcatcgcccacctgctgcgcgccggcgaggcgctgccc
ggcgagatcctcgcgatcaccttcaccaacaaggccgccgccgagatgcgcgagcgcgtc
gaggagctgatcggccccgccgcccgctcgatgtgggtctccaccttccacagcgcctgc
gtgcgcatcctgcgccgcgacgccgccgcggccgggctgaagagctccttcacgatctac
gacagcgccgactcgctgcgcctgatcaccacgatcgccaaggacctccagctcgacacc
aagaagcacgccccccgcgcgctcgcctcccgcatctcgacgctgaagaacgacctcgtg
gacccgatcgacttcgccgatcaggccgagagcgcgaagaacccgttcgagaagacgctc
gcgaagatcttcacgaactacaccgagcgcctgcgccaggccaacgccgtcgacttcgac
gacctgatcggcctgaccgtcgcgctgctgcgcgagaaccccgcgatccgcgagggctac
cggcgccgcttccgccacctgctggtggacgagtaccaggacaccaacaccgcccagtac
cagctggtgcgggagctggtgggggaggacccgcgcgccgatctcaccgtcgtcggcgac
tccgaccagtcgatctacgccttccgcggtgcgacgatccgcaacatcatcgagttcgag
caggacttcccctccgcgcgcaccatcgtgctggagcagaactaccgctcgacccagaac
atcctcaccgccgcgaacgcggtgatcgaggagaaccagggccgccgcaagaagaacctc
tggaccgaccagggcgagggggagcagatcaccctctacgtcgccgacgacgagcagtcc
gaggcccgctacatcggccgtcagatcgacgcgctcgtggacgacggccgtcgtgccggg
gacatcgcgatcttctaccgcgccaacgcccagtcccgggcgctggaggaccagctgatc
cgcgtgggcctgccgtaccgcgtggtgggcggcacgcgcttctacgagcggcgcgagatc
aaggacgcgatcgcctacctgcaggtgctcgccaaccccgccgacgagatcaacctgcgc
cgcatcctcaacgtccccaagcgcgggataggcgaccgcgccgaggccgcgatcgcgatg
ctcgccgagcgggaccggatcagcttcggggaggcgctgcgccgcgcggaggaggcgccg
ggcatcgcgacccgctcgctgaacgccgtgcgcaccttcgtggcgatgctcgaggacctc
caggcgatggccgagcgcggcgatggccccgccgagctgctcgaggcgatcctcacccgc
tccggctactacgccgagctgcagggcagcgacgacccgcaggacgaatcccgcctggag
aacctcgccgagctgatcagcgtggccgcggagttcgaggcgcagatggaggagctcgac
gcgctcgccagcgagatggaggacgaggagggcgacgccgccgcggccgggggcacggaa
ggcgctgccgaggccgaggaggatgcagccgccgagggcacagcggacgcagccgcggcg
ggctccgcggacgcggtcgccgaggcgaccggcgcggtcgtcgccggagcggcccccgtt
tccgaccccgtcggcgccgacatcgccccggacgcggcgctgaccgcgccggacgatccc
gaagcgagcctcgtggaccgcttcctggagaaggtctccctcgtcgcggacgccgaccag
ctgccaggggaggaggaccagttcgtcaccctcatgaccctgcacaccgccaagggcctc
gagttcccggtcgtgttcctcaccggcatggaggacggaaccttcccccacaaccgcacg
ctccaggatcccgacgagctcgaggaggagcggcgactggcctacgtgggcatcacccgc
gcccgcgagaagctctatctcacccgcgcgcagatgcgctcgatgtggggacagtcccag
tacatgcccgccagccgcttcctcgacgaggtgccggaggaggtcctggacgtggcgcgc
gccggctccaccctcggcggcgccgggttcggcggcggaagcttctccggcggctccggc
ttcggcggcggtcgcggcgggggccgggggccgtccttcagcggcggggtcggcggcggc
cgctccgacgtgaagcgccccagcttcggatccggtcgcaccgccacgcccaccgacaag
ctcccgcagctcgccgtcggcgaccgcgtcacccacgactccttcgggatgggcacggtc
gcggaggtctccggacagggcgacaagacgcaggtcgaggtccagttccgcgacccccac
ggccgcaagcgcctgctactgcgctacgccccgctgaccaagctctga
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