Brachybacterium sp. GU-2: RBL05_03275
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Entry
RBL05_03275 CDS
T10376
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
brac Brachybacterium sp. GU-2
Pathway
brac03420
Nucleotide excision repair
brac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
brac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RBL05_03275
03430 Mismatch repair
RBL05_03275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brac03400
]
RBL05_03275
Enzymes [BR:
brac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RBL05_03275
DNA repair and recombination proteins [BR:
brac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RBL05_03275
MMR (mismatch excision repair)
Other MMR factors
RBL05_03275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Viral_helicase1
HHH
PrkA
Motif
Other DBs
NCBI-ProteinID:
WME23774
LinkDB
All DBs
Position
complement(1067380..1069509)
Genome browser
AA seq
709 aa
AA seq
DB search
MTDQTAAPDATAPCAPPDAESLLAALDPEQREVAESFGTPLCVLAGAGTGKTRAITHRIA
YGVSTGQLNPRHVLAVTFTAKAAAEMRSRLRDLGVPAVQARTFHSAALRQLRHFWPRVVG
GPMPDIIPSKYAAVGEACSRLHLSVDRAALRDIVAEVEWSRVSMLTPETYPDAAAQARRP
GVAGFDSRSISRILTQYEEVKKEHNVIDFEDVLLHMVGFLTERGDVAREVRSQYKHFVVD
EYQDVSALQHALLRLWLGTSDDLCVVGDAAQTIYTFAGARASYLLDFRSEFKRARTIRLE
RNYRSTPEIVRMANTVLDGAQGRTRAGRLTLVSQRDAGPPPLVESFPDDAAEADGIADRI
GALIGEGRTASEIAILFRTNSQSEAFEQALTARGIGYLVRGGDRFFERQEVRRAMVSLRA
ATRVEQLDPARAVRDVLSQQGWSEQAPETTGAIRDRWDSLNALVGLTDTITARPGATMAD
VVRELEERAESQAAPVVDGVTLASVHAAKGLEWPVVFVVGASDGLLPISMAKTPAEVEEE
RRLFYVALTRARDLLTVSWAAARTPGARGSRKPSRFLDGVLAHPDSPRTAPGPGPRRTGR
RSATVYSECRVCGQGLVSAAEQRRGRHDGCPSTAGPELLAELRSWRREESGRRGVPAYAV
LTDAALEAVAERAPRTEEELLAVPGIGPAKVSSYGAALLQILAGPSEKD
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccagaccgccgcccccgacgccaccgccccgtgcgccccgccagatgcggag
tcgctcctcgccgcgctcgaccccgagcagcgcgaggtggcggagagcttcggcacgccg
ctgtgcgtgctcgccggcgccggcaccgggaagacccgcgcgatcacccaccgcatcgcg
tacggcgtcagcaccggtcagctgaacccccgccacgtcctcgccgtcaccttcaccgcg
aaggccgccgccgagatgcgctcgcgcctgcgggacctgggcgtgcccgccgtgcaggcc
cgcaccttccactccgccgcgctgcgccagctgcgccacttctggccccgcgtcgtcggc
gggccgatgcccgacatcatccccagcaagtacgccgcggtgggggaggcctgctcccgc
ctgcacctcagcgtggaccgcgcggcgctgcgcgacatcgtcgccgaggtcgagtggtcg
cgggtgtcgatgctgacccccgagacctatccggacgcggccgcgcaggcccgccgcccg
ggcgtggccggcttcgactcccgctccatctcccgcatcctcacccagtacgaggaggtg
aagaaggagcacaacgtcatcgacttcgaggacgtgctgctgcacatggtcggcttcctc
accgagcgcggcgacgtcgcccgcgaggtccgctcccagtacaagcacttcgtcgtcgac
gagtaccaggacgtctccgccctgcagcacgcgctgctgcggctgtggctgggcacctcc
gacgacctgtgcgtggtgggcgacgccgcccagaccatctacaccttcgccggcgcccgc
gcctcctacctgctggacttccgcagcgagttcaagcgcgcccgcaccatccgcctcgag
cgcaactaccgctccaccccggagatcgtgcgcatggccaacaccgtcctcgacggcgcg
cagggccgcacccgcgccggtcgtctcaccctcgtctcccagcgcgatgccgggccgccg
ccgctggtggagtccttccccgacgacgccgccgaggccgacgggatcgccgaccgcatc
ggcgcgctgatcggcgagggccgcaccgcctccgagatcgcgatcctgttccgcaccaac
agccagtccgaggcgttcgagcaggcgctcaccgcccgcggcatcggctacctggtgcgc
ggcggggaccgcttcttcgaacggcaggaggtgcggcgcgcgatggtgtccctgcgcgcc
gcgacccgggtcgagcagctcgacccggcccgcgccgtccgcgacgtcctctcccagcag
ggctggtccgagcaggccccggagaccaccggcgcgatccgcgaccgctgggactcgctg
aacgccctcgtcggcctcaccgacaccatcaccgcacggcccggcgcgaccatggccgac
gtggtccgcgagctcgaggagcgggccgagtcgcaggccgcgcccgtcgtcgatggcgtc
accctcgcctccgtccacgccgccaagggcctggagtggccggtcgtgttcgtggtcggc
gcgagcgacgggctgctgccgatctccatggccaagaccccggccgaggtcgaggaggag
cggcgactgttctacgtcgccctcacccgcgcccgcgacctgctcaccgtcagctgggcc
gcggcccgcacccccggcgcccgcggctcccgcaagccctcccgcttcctcgacggggtg
ctcgcccatcccgactccccgcgcaccgcgcccggtcccggaccgcgccgcaccggccgc
cgctccgccaccgtctactccgagtgccgggtgtgcgggcagggcctcgtctccgccgcc
gagcagcggcgcggccgccacgacggctgcccctccaccgccgggcccgagctcctcgcc
gagctgcgcagctggcgccgcgaggagtccgggcggcgcggcgtccccgcatacgccgtg
ctcaccgatgccgccctcgaggccgtcgccgagcgcgcgccccgcaccgaggaggagctg
ctggccgtgcccgggatcggccccgcgaaggtctcctcctacggcgccgcgttgctgcag
atcctcgccggaccctccgagaaggactga
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