Brachybacterium sp. GU-2: RBL05_05335
Help
Entry
RBL05_05335 CDS
T10376
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
brac Brachybacterium sp. GU-2
Pathway
brac03030
DNA replication
brac03430
Mismatch repair
brac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RBL05_05335
03430 Mismatch repair
RBL05_05335
03440 Homologous recombination
RBL05_05335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brac03032
]
RBL05_05335
03400 DNA repair and recombination proteins [BR:
brac03400
]
RBL05_05335
Enzymes [BR:
brac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RBL05_05335
DNA replication proteins [BR:
brac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RBL05_05335
DNA repair and recombination proteins [BR:
brac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RBL05_05335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
RNase_H_2
DUF7508
DNA_pol_A_exo1
DEDDh_C
DUF6059
Motif
Other DBs
NCBI-ProteinID:
WME24137
LinkDB
All DBs
Position
616745..618409
Genome browser
AA seq
554 aa
AA seq
DB search
MPARRQLSFEDLGTPLAEATLVVVDLETTGTDPSADAITEIGAVKVRGGEVLGEFRTFVD
PERPIPAYIASLTGISDATVRGAPSIRTVLPMFLDFVGPDAALVAHNARFDIGFLRARAA
ECALEWPAPTVLDTLALARTVFRRDEVRDHKLSTLAAHVGAAVTPDHRALSDARATVDVL
HAIIARLGPTGASTLEDLGTAHRRAKPVQLRKKHLAADVPSVPGVYQFLDAHGSVLYVGT
SRNLRSRVRTYFTASETRRAILDMLPRAESLRVIECATATEAAVRELRLIAQEKPPSNRR
GLRPEAAHWLRLGPTGEGLRGARLARTEADGSAHIGPLASRHDAQPLRGLLTDAVMGRGA
ALEADPARSAAPSSGHHERLRRAMVADPREVLDHAASRLRAHVDAGRYEEAEKLRRLALA
YLDAARRASRLRALAEVPLLIAARPSTEAVIGGRGWELLAVRYGRFSGTTLVPAAKDPLP
FARSLAMTGTGEAELAAPLCQGYHQEAEILLGWLEGEGVRTVLCEGSWQVPARARFEAEH
LSRRFAMTSTAPGE
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcacgccgtcagctcagcttcgaggacctgggcaccccgctcgcggaggcgacg
ctggtggtggtcgatctcgagaccaccgggacggacccctccgcggacgcgatcaccgag
atcggcgcggtgaaggtccgcggcggcgaggtgctcggcgagttccgcaccttcgtggac
ccggagcgtccgatcccggcctacatcgcctccctcaccggcatctccgatgcgaccgtg
cgcggcgccccctcgatccggaccgtgctgccgatgttcctggacttcgtcgggcccgac
gccgcgctggtggcccacaacgcccgcttcgacatcggcttcctgcgcgcccgcgccgcc
gagtgcgcgctggagtggcccgcgccgaccgtgcttgacaccctcgcgctcgcccggacg
gtcttccgccgcgacgaggtgcgcgatcacaagctctcgaccctcgccgcccatgtcggg
gcggcggtcaccccggaccaccgtgccctctcggatgcccgcgcgacggtcgacgtgctc
cacgcgatcatcgcccggctgggcccgaccggcgcctcgaccctcgaggacctcggcacg
gcccaccgccgggccaagcccgtgcagctgcgcaagaagcacctcgcggccgacgtcccc
tcggtccccggcgtctaccagttcctcgatgcgcacggctcggtgctgtacgtcggcacc
tcccggaacctgcgctcccgggtgcgcacctacttcaccgcgagcgagacgcgccgcgcg
atcctggacatgctgccgcgcgcggagtcgctgcgcgtgatcgagtgcgccaccgccacc
gaggccgccgtgcgcgagctgcggctgatcgcgcaggagaagccgccctcgaaccggcgc
gggctgcgcccggaggcggcacactggctgcggctcgggccgacgggcgaggggctgcgc
ggggcgcggctggcccgtacggaggccgacggctcggcgcacatcggccccctcgcctcc
cggcacgacgcccagccgctgcgcgggctgctcaccgacgcggtcatggggcgcggtgcc
gcgctggaggccgatcccgcgcgcagcgccgccccgtcgagcgggcatcacgagcggctg
cgccgcgccatggtcgccgacccgcgcgaggtgctcgaccatgccgcctcccggctgcgc
gcccacgtcgacgcgggacgctacgaggaggcggagaagctgcgccgactagctctcgcc
tatctggacgccgcccgtcgcgcctcccggctgcgcgccctcgcggaggtgccgctgctc
atcgcggcccggcccagcaccgaggccgtgatcggcggacgcggctgggagctgctggcc
gtgcgctacggacggttctccgggaccaccctggtgccggcggcgaaggaccccctgccc
ttcgcgcgttccctggcgatgacggggaccggcgaggccgagctcgccgcgcccctgtgc
caggggtatcaccaggaggccgagatcctgctggggtggctcgagggcgagggcgtgcgc
acggtgctgtgcgaggggtcgtggcaggtgccggcccgggcccgcttcgaggcggagcac
ctctcccggcgcttcgccatgacctcgaccgctccgggggaatag
DBGET
integrated database retrieval system
