Brachybacterium sp. GU-2: RBL05_08365
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Entry
RBL05_08365 CDS
T10376
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
brac Brachybacterium sp. GU-2
Pathway
brac00300
Lysine biosynthesis
brac00470
D-Amino acid metabolism
brac01100
Metabolic pathways
brac01110
Biosynthesis of secondary metabolites
brac01120
Microbial metabolism in diverse environments
brac01230
Biosynthesis of amino acids
Module
brac_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
brac00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RBL05_08365 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RBL05_08365 (lysA)
Enzymes [BR:
brac01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RBL05_08365 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
SEF14_adhesin
Motif
Other DBs
NCBI-ProteinID:
WME24685
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Position
3649167..3650579
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AA seq
470 aa
AA seq
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MRAHEAGALHGNDAAPTWLPYPSDVNTLIDGLWSRTTRRTEDGAVEVGGVSVARIAEEVG
TPAFVLDEDDFRHRARAFRDAFAEAFRPLAGADVYYAGKAFLCGAVARWVEEDGLGLDVC
TGGELAVALRAGFPGERIALHGNNKSLAEIRRALEAGVGRIVVDSLDEIDLVDAIAAELG
LRAAVMLRVTTGVEAHTHEFIATAHEDQKFGLSLTGNTAFEAVRRVLAAEHLDLVGLHSH
IGSQIFDTGGFEVAARRVLDLVAQVRDQLDHTITQLDLGGGFGVMYNTQHTPSTPEALAS
GIAGIVEKQCHELELEVPHVSFEPGRAIAGPSTQTLYTVGTVKDVRLGGPHHRVYVSVDG
GMSDNVRTALYDADYSCLLSGRVSEQQPEVVRVVGKHCESGDIVVKDEYLPADVRRGDLV
SVPVTGAYCYSLASNYNHVPRPPVIAVKDGEIRTLIRRETEEDLLGLDVG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcccacgaagccggtgccctccacggcaacgacgcggcccccacgtggctgccc
taccccagcgacgtcaacaccctgatcgacggcctgtggtcccgcaccacccgccgcacc
gaggacggcgcggtcgaggtgggcggggtgagcgttgcccggatcgccgaggaggtcggc
acccccgccttcgtgctcgacgaggacgacttccgtcaccgggcgcgcgccttccgcgac
gccttcgccgaggccttccgtcccctcgccggggccgacgtctactacgcgggcaaggcc
ttcctgtgcggcgctgtcgcccgctgggtcgaggaggacggactggggctggacgtgtgc
accggcggcgagctcgccgtcgccctgcgcgccggcttccccggcgagcggatcgcgctg
cacggcaacaacaagtccctcgccgagatccgccgcgccctcgaggcgggggtgggccgg
atcgtcgtggactccctggacgagatcgacctggtcgacgccatcgccgccgagctcggt
ctgcgcgccgccgtgatgctgcgggtgaccacgggcgtggaggcgcacacgcacgagttc
atcgccaccgcccacgaggaccagaagttcgggctctccctcaccggcaatacggccttc
gaggccgtgcgccgggtcctggccgccgagcacctcgacctcgtcggcctgcactcccac
atcggctcccagatcttcgacacgggcggcttcgaggtcgcggcccggcgcgtgctggac
ctggtcgcgcaggtgcgcgaccagctcgaccacacgatcacccagctcgacctgggcggc
ggcttcggcgtcatgtacaacacccagcacacgccctcgaccccggaggccctcgccagc
gggatcgcggggatcgtggagaagcagtgccacgagctcgagctcgaggtcccccacgtc
tccttcgagcccggccgcgcgatcgccggcccctccacgcagacgctctacaccgtcggc
accgtcaaggacgtgcgcctgggcggcccccaccaccgcgtctacgtctccgtcgacggc
ggcatgagcgacaacgtccgcaccgcgctgtacgacgcggactactcctgcctgctctcg
ggccgcgtctccgagcagcagcccgaggtggtgcgcgtggtcggcaagcactgcgagagc
ggcgacatcgtggtcaaggacgagtacctccccgccgacgtgcgccgcggcgacctggtc
tccgtcccggtcaccggcgcgtactgctactcgctcgcctcgaactacaaccacgtcccg
cgaccgcccgtgatcgcggtgaaggacggggagatccgcaccctcatccgtcgcgagacg
gaggaggacctgctcggcctcgacgtcggctga
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