Brachybacterium sp. GU-2: RBL05_09410
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Entry
RBL05_09410 CDS
T10376
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
brac Brachybacterium sp. GU-2
Pathway
brac00260
Glycine, serine and threonine metabolism
brac00460
Cyanoamino acid metabolism
brac00630
Glyoxylate and dicarboxylate metabolism
brac00670
One carbon pool by folate
brac00680
Methane metabolism
brac01100
Metabolic pathways
brac01110
Biosynthesis of secondary metabolites
brac01120
Microbial metabolism in diverse environments
brac01200
Carbon metabolism
brac01230
Biosynthesis of amino acids
brac01240
Biosynthesis of cofactors
brac04981
Folate transport and metabolism
Module
brac_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
brac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RBL05_09410 (glyA)
09102 Energy metabolism
00680 Methane metabolism
RBL05_09410 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RBL05_09410 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RBL05_09410 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RBL05_09410 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RBL05_09410 (glyA)
Enzymes [BR:
brac01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RBL05_09410 (glyA)
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GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
DegT_DnrJ_EryC1
SPOR
SelA
Motif
Other DBs
NCBI-ProteinID:
WME21771
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Position
3426271..3427539
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AA seq
422 aa
AA seq
DB search
MNVLDKSVADIDPEIAQVLDRELARQQGTLEMIASENFVPRSVLQVQGSVLTNKYAEGYP
GKRYYGGCEEVDVAEQIAIDRAKALFGAEHANVQPHSGATANAAVMHALARPGDKLMGLS
LAHGGHLTHGMKINFSGRLYDIVAYETEPGTGLIDMDKVRELAIAEQPKVIVAGWSAYTR
QLDFPRFREIADEVGAALWVDMAHFAGLVAAGLHPSPVPYADVVSTTIHKTIGGPRSGMI
LCKEKWAKKIDSAVFPGQQGGPLMHVVAAKAVALKIAASEDFKDRQARTLEGAQILADRL
QQEDTKAAGVKVISGGTDVHLVLVDLVDSELDGQQAEDRLHEAGITVNRNAVPNDPRPPR
VTSGLRIGTPALATRGFGAAEFTEVADVIALALTGGADVESLRARTAKLAESKPLYPALQ
QY
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgtcctcgacaagtctgtcgccgacatcgatcccgagatcgcccaggtgctcgac
cgcgagctggcccgacagcagggcacgctcgagatgatcgcgtcggagaacttcgtcccc
cgctcggtcctgcaggtgcagggctcggtcctgaccaacaagtacgccgagggctacccc
ggcaagcgctactacggaggctgcgaggaggtcgacgtcgcggagcagatcgcgatcgac
cgcgcgaaggccctgttcggcgccgagcacgcgaacgtccagccgcactcgggcgcgacc
gcgaacgccgcggtgatgcacgccctcgcccgcccgggcgacaagctcatgggcctctcg
ctcgcccacggcggccacctcacccacggcatgaagatcaacttctccggccgtctctac
gacatcgtcgcgtacgagaccgagccgggcacgggcctgatcgacatggacaaggtgcgc
gagctcgcgatcgccgagcagcccaaggtcatcgtcgccggctggtccgcctacacccgc
cagctcgacttcccccgcttccgcgagatcgccgacgaggtcggggccgcgctgtgggtc
gacatggcgcacttcgcgggcctcgtcgcggcgggcctgcaccccagccccgtgccctac
gcggatgtcgtctccaccaccatccacaagaccatcggcggccctcgctccggcatgatc
ctgtgcaaggagaagtgggcgaagaagatcgactcggcagtgttccccggccagcagggc
ggcccgctcatgcacgtcgtcgccgcgaaggccgtggcactgaagatcgccgcctcggag
gacttcaaggaccgccaggcccgcaccctcgagggtgcgcagatcctcgccgaccgcctc
cagcaggaggacaccaaggcggcgggcgtcaaggtcatctccggcggcaccgacgtgcac
ctggtgctcgtggacctcgtcgactccgagctggacggccagcaggcggaggaccgcctg
cacgaggccggcatcaccgtgaaccgcaacgcggtccccaacgacccgcgcccgccgcgg
gtcacctcgggcctgcgcatcggcaccccggcgctcgccacccgcggcttcggcgcggcg
gagttcaccgaggtcgccgacgtgatcgcgctggcgctgaccggcggggccgacgtcgag
tcgctcagggcccgcaccgcgaagctcgccgagtccaagccgctctaccccgcgctgcag
cagtactga
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