Brachybacterium sp. GU-2: RBL05_09870
Help
Entry
RBL05_09870 CDS
T10376
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
brac Brachybacterium sp. GU-2
Pathway
brac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
brac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RBL05_09870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brac03400
]
RBL05_09870
Enzymes [BR:
brac01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
RBL05_09870
DNA repair and recombination proteins [BR:
brac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RBL05_09870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WME21854
LinkDB
All DBs
Position
complement(3318205..3318855)
Genome browser
AA seq
216 aa
AA seq
DB search
MSIRRPSPLGGRRPSRDELTDFATPDPDAIDDVLPDPRRGEELRLLIVGINPGLWTAAVN
APFARPGNRFWPSLHRAGLTSRLVDASRGLDPEDEQDLRTRGIGITNLIGRATVRADELG
REELRASGRRLVKRLETLRPRTVAIAGITAFRTAYALPRARLGRQDPAEVEGWPAGIDLH
VVPQPSGLNAHATIASLAEDWRVVAAAAGVRHVDES
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgagcatccgtcgcccctccccgctcggcggccgacgtccctcccgggacgagctgacc
gacttcgcgacccccgaccccgacgcgatcgacgacgtgctgccggacccgcgacggggc
gaggagctgcgcctgctgatcgtcggcatcaacccggggctgtggaccgcggccgtgaac
gcccccttcgcccggcccgggaaccgcttctggccctccctgcaccgcgccggcctcacc
tcccgcctcgtggacgcctcccggggcctggaccccgaggacgagcaggacctccgcacc
cgcggcatcgggatcacgaacctgatcggccgtgcgaccgtgcgcgccgacgagctgggg
cgcgaggagctgcgcgcgtccggccgccgcctcgtcaagcggctcgagacgctgcgtccc
cgcacggtcgcgatcgccgggatcaccgccttccgcaccgcctacgcgctgccccgcgcc
cggctcggacggcaggaccccgccgaggtcgagggctggccggccgggatcgacctccac
gtcgtcccccagccctccggcctgaacgcccacgcgacgatcgcctccctcgccgaggac
tggcgcgtcgtggcggccgccgcgggtgtccgtcacgtggacgagagctga
DBGET
integrated database retrieval system
