Bradyrhizobium sp. BF49: BF49_0086
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Entry
BF49_0086 CDS
T04337
Name
(GenBank) FIG041266 ATPdependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
brad
Bradyrhizobium sp. BF49
Brite
KEGG Orthology (KO) [BR:
brad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brad03400
]
BF49_0086
Enzymes [BR:
brad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BF49_0086
DNA repair and recombination proteins [BR:
brad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BF49_0086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
CUT09006
LinkDB
All DBs
Position
I:95877..99023
Genome browser
AA seq
1048 aa
AA seq
DB search
MRVFSVPVSVPFLRTVVASLLDGRLVEGFEARKEPARLADATLYLPTRRAMRVVREIFLD
EMKADAVVLPRIVALGDIDEDELAFADEGEQFSGATPLDIPPRLGELERRLTLAQLVAAW
AKGPVLSPLVVGGPASTLALASDLARLIDDMVTRGVAWSALDGLVPDMLDRYWQHSLEFL
RIARIAWPGHLAEIKRIEPAARRDLLIDAEARRLTAHPHGPVIAAGSTGSMPATARFLHA
VASLPHGAVVLPGLDTDLDDDAWRSIGGVRDSLGKFAEHPVSNHPQYAMHALLDRFGIKR
SDVDSLKPPAEGGRDLLASESMRPSAKTEIWHDRLKQPDVAVKITGGMKNLAVVEAPNPE
MEALAIAIAMREARHLDKSAALVTPDRALARRVMAALTRWDLAFDDSGGDVLMETSAGVF
ARLTAEAATKGLEPPTMLAMLKHPLCRLGRAPGAWKAAIEGLELALLRGTRPPAGTAGLL
REFNRFREELAKLWRSEVSALHKAEPRARLKAEDLDRIQVLIDGLRQALAPIESLASSKS
FDFAELAHRHREIMIELSRDEQGIPLAFEEREGLALASAFDDLLRGGTTSGLMVTLPDYA
DVFQTAFGDRAVRRRDRPGARLQIYGPLESRLMQADRVIVGGLIEGVWPPAPRIDPWLSR
PMRHQLGLDLPERRIGLSAHDFAQLLGGEEVILTHSAKAGGAPAVASRFLHRLEAVAGDA
HWKAAIRAGEKYVQFAAALDQPDEVRPIKQPEPRPPRATRPLRMSVTGIEDWLRDPYTIY
AKHILRLDALDPVDMPLSAADRGSAIHDALGEFTERYATNLPDDPARVLRAIGEKHFAPL
MERPEARALWWPRFQRITRWFGEWETARRGVIEAIAAETRGEISIPLDHGRSFRLSARAD
RIERRQGGGYAILDYKTGQPPTGKQVRMGLSPQLTLEAAILREGGFPDIDAGASVSQLVY
VRLSGNNPPGEERILELRYRQGDEPQPPDTAAAEARAKLEALIRAFEDENQPYTSLNLPM
WTNRYGAYDDLARIKEWSAAGGLGIEEW
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttttcagcgttccagtctcagttccgttcctgcgcaccgtcgtcgcaagcctg
ctcgacggccggctggtcgagggctttgaggcgcgcaaggagccggcacggttggcggat
gccacgctgtacctgccgacacggcgcgccatgcgcgtcgtccgcgagatcttcctcgac
gagatgaaggcggatgcggtcgtgctgccgcgcatcgtcgcgctcggcgacatcgacgaa
gatgaactcgctttcgccgatgaaggcgaacagttttccggcgcaacgccgctcgacatt
ccgccgcggctcggcgagctcgaacggcggctgacactggcgcaactcgtcgcggcctgg
gccaagggtccggtgttgtctccgctggtcgtcggcggccccgcttcgacgctggcactg
gcgtccgatctcgcgcgcctgatcgacgacatggtcacgcgcggtgtcgcctggagcgcg
ctcgatggcctcgtgcctgatatgctcgaccggtactggcagcactcgcttgaattcctg
cgcatcgcgcgcatcgcctggcccggtcatctcgccgaaatcaaacgcatcgagcccgct
gcccgccgcgacctcctgatcgatgccgaagccaggcggctgaccgcgcatccccatggc
cccgtgatcgcggccggttcgaccggctcgatgccggccacggcaagatttctccacgca
gtcgcctcgctgccgcatggcgccgtggtgctgcccggcctcgataccgatctcgacgac
gatgcctggcgcagcatcggcggcgttcgcgactcgctcggcaagttcgcggagcacccg
gtctcgaaccatccgcaatatgccatgcacgcgctgctggatcgctttggcatcaagcgc
agcgacgtcgatagtctcaagcctccggcggaaggcggccgcgatctcctggcgtcggaa
tcgatgcggccgtcggccaagaccgagatctggcacgaccggctgaagcaaccggatgtg
gccgtaaagatcaccggcggcatgaagaacctcgcggttgtcgaagctcccaaccctgaa
atggaagcgctcgccatcgccattgcgatgcgcgaggcgcggcacctcgacaaatccgcg
gcgcttgtcacacccgatcgcgcgctggcgcggcgggtgatggccgcgctgacacggtgg
gatctcgcattcgacgattccggcggcgacgtcctgatggagacctccgccggcgtcttt
gcgcgactgacagccgaggctgcgaccaagggactggagccgccgacgatgctggcgatg
ctgaagcatccgctgtgccggctcggccgggcgcctggcgcatggaaagcggcgatcgaa
ggcctggagctcgctttgttgcgcggcacgcgcccgcctgcaggcactgccggcctgctg
cgcgaattcaatcgctttcgcgaggagctggcaaagctgtggcgcagcgaggtctccgcc
ctgcataaggccgagccgcgtgcacgtctcaaggccgaagacctcgatcgcattcaggtg
ctgatcgatggcttacgacaagccttggcgccgatcgagagtctagcctcatcgaagtcg
ttcgatttcgccgagctcgcacatcggcatcgcgagatcatgatcgagctgtcgcgcgac
gagcagggcatcccgctggcgttcgaggagcgcgaaggcctcgcgctcgcgagcgccttt
gacgatctcctgcgcggcggcacgaccagcggactgatggtcacgctgcccgactacgca
gacgtcttccagaccgcattcggcgatcgcgcggtgcggcggcgggacaggccgggcgcg
cggctgcagatttacggcccgctggaatcacgcctgatgcaggccgaccgcgtcatcgtc
ggcgggctgatcgagggggtctggccaccggcgccgcgcatcgatccgtggctgagccgg
ccgatgcggcaccagctgggcctcgatctgccggaacgccgtatcggcctctccgcgcat
gattttgcgcaattgctcggcggcgaggaggtcatcctcacccactccgccaaggctggc
ggtgcgccggcggtcgcctcgcgcttcctgcaccggttggaggcggtcgcgggcgatgcg
cactggaaggctgccattcgcgcgggcgagaaatacgtgcagttcgcagccgcgctggac
cagcccgacgaggtcagaccgatcaagcagcccgaaccgcgaccgccgcgcgcgacccgg
ccgctcaggatgtctgtgactgggatcgaggactggctgcgcgatccctatacgatctac
gcaaaacacattttgcggctcgacgcgctcgatcccgtcgacatgccgctgtcggcggcc
gaccgcggctcggcgatccatgatgcgctcggcgagttcacggaacgctacgccacgaat
ctgcccgacgatcctgcgcgcgtgctgcgggcgatcggcgaaaaacattttgcaccactc
atggagcgacccgaggcgcgggcgctgtggtggccgcgcttccagcgcatcacgcgctgg
ttcggcgaatgggagacggcacggcggggcgtgatcgaggcgatcgccgcggaaacccgc
ggcgagatctcgatcccgctcgaccatgggcgcagcttccgtctttccgcccgcgccgac
cgcatcgaacggcgccagggcggcggctacgccatcctcgactacaagaccggccagcca
ccgaccggcaagcaggtccgcatgggcctgtcaccgcagctcacgttagaagccgcgatc
ctgcgcgagggcggctttcccgacatcgacgccggcgcgtccgtgagccagctcgtctat
gttcgcctgagcggcaacaatccgccgggcgaagagcgcattctcgagctcagatatagg
caaggtgacgagccgcagccgccggacaccgcggctgcggaggcaagggccaagctcgag
gcactgattcgcgccttcgaggacgagaaccagccctatacctcgctgaacttgccgatg
tggaccaaccgctacggcgcctatgacgatctcgcccggatcaaggaatggtccgcggcc
ggtggattggggatcgaggaatggtga
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