Bradyrhizobium sp. BF49: BF49_0122
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Entry
BF49_0122 CDS
T04337
Name
(GenBank) Ribonuclease D related protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
brad
Bradyrhizobium sp. BF49
Brite
KEGG Orthology (KO) [BR:
brad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
brad03016
]
BF49_0122
Enzymes [BR:
brad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BF49_0122
Transfer RNA biogenesis [BR:
brad03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BF49_0122
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
CUT09042
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All DBs
Position
I:complement(134570..135184)
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AA seq
204 aa
AA seq
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MTVRLHRGDLPDLSRYTGAVAIDTETMGLNPHRDRLCVVQLSPGDGSADVVQIPKGHTDA
PNLKALLANPANTKIFHFARFDVAVLYQTFGVMTGPIYCTKIASRLIRTYTDRHGLKDLV
REVLNVDLSKQQQSSDWGSDSLTEPQLAYAASDVLHLHGLRERLDAMLVREGRTALAKAC
FDFLPTRALLDLQGWAEEDIFAHS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtacgcctgcaccgcggcgacctgcccgatctgtcccgttacaccggcgcggtg
gcgatcgacaccgagaccatgggcctgaacccgcatcgcgaccggctctgcgtggtgcag
ctctcgcccggcgacggcagcgcggacgtggtgcagatcccgaagggtcacaccgacgcg
ccgaacctgaaggcccttttggccaatcccgccaacacgaaaatcttccactttgcgcgg
ttcgacgtcgcggtgctgtaccagacattcggtgtcatgaccgggccgatctactgcacc
aagatcgcctcccgcctgatccgcacctataccgaccgccatggcctcaaggacctcgtg
cgcgaggtgctcaatgtcgacctctccaagcagcagcaatcgagcgattggggttccgac
agcctgaccgagccgcagctcgcctacgccgcctccgacgtgctgcatctgcacggcttg
cgcgagcggctcgatgccatgctggtgcgggaaggccgcacggcgctggccaaagcctgt
ttcgatttcctgccgacccgcgctttgctcgatctccagggctgggccgaagaggacatt
ttcgcgcattcctag
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