Bradyrhizobium sp. BF49: BF49_0268
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Entry
BF49_0268 CDS
T04337
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
brad
Bradyrhizobium sp. BF49
Brite
KEGG Orthology (KO) [BR:
brad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brad03032
]
BF49_0268
03400 DNA repair and recombination proteins [BR:
brad03400
]
BF49_0268
Enzymes [BR:
brad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BF49_0268
DNA replication proteins [BR:
brad03032
]
Prokaryotic type
DNA Topoisomerases
BF49_0268
DNA repair and recombination proteins [BR:
brad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BF49_0268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
CUT09188
LinkDB
All DBs
Position
I:274895..276064
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AA seq
389 aa
AA seq
DB search
MMDQRNFGTMRPASADPAAIALAKALGQWPKPAGSGRPSPKKAFDTAPATTVEALARELG
LRLGDQNELTIRRIRRGKGYSFVRPNGVHIRDARIIRRLHSMAVPPAYREVRYSADPSTH
LQAVGRDAAGRLQYRYHADWEKVREQRKAHRLEKLVGALPKIRRKVSAFLSGDEPTREFA
LSAVIELIARTAIRPGNESYARLNGTRGATTLLKSNVSLEDDNFVLTFKAKGGKAVRKEC
DAAKLVRAIGILQGVPGKRMFQYRDAYGIVRAVSTTQVNAFLREIAGIKISLKDFRTLMA
SAVVVESLSRITPATSQRGRKKQVLEAIRGAADQLSNTPAICRKSYVHDTIVTAFEDGIL
ERFAATMKGQRSQARREQLLQQVVATAAV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcagcggaatttcgggacgatgcggcccgcttcagccgatcctgctgccatt
gcgctggccaaagccctcggacaatggccgaagccggccggttccggccgtcccagcccg
aaaaaagcgttcgacacggcacctgcgacgacggtcgaggccctcgccagggaactgggc
ctgcggctcggtgaccagaacgagctgaccattcgccgcatcaggcgcggcaagggctat
tcgttcgtgcgacccaacggggtccacatccgcgatgcccgcatcattcggcggctgcat
tccatggcggtgccgccggcctatcgcgaggtgcgctactcggccgatccgagcacgcat
ctccaggcggtgggacgcgatgccgcgggccggctgcaatatcgctatcacgccgattgg
gagaaggtccgcgagcaacgcaaggcgcatcgtctggaaaaactcgtcggcgcgctgccc
aagatccggcgcaaggtctcggcgttcctgtcgggcgacgagccgacccgcgaattcgcg
ctctcggccgtcatcgaactgattgcgcgcaccgcgatccgccccggcaacgaatcctat
gcccgtctcaacggcacccgcggagccaccacgctgctgaagtccaacgtctcgctggaa
gacgacaacttcgtgctgaccttcaaggcgaagggcggcaaggccgtgcgcaaggagtgc
gacgcggccaagctcgtgcgtgccatcgggattttgcagggcgttccgggcaagcgcatg
ttccagtatcgcgatgcctacggcatcgtgcgcgcggtcagcaccacgcaggtgaacgcg
tttctgcgcgagatcgccggcatcaagatatcgctaaaggatttccgcacgctgatggcc
tctgccgtggtcgtggaatcgttgtcgcggatcacgcccgcgaccagccagcgcggccgc
aagaagcaggtgctggaggcgatccggggcgctgccgatcagctctccaacacgccggcg
atctgccgcaagagctatgttcacgacaccatcgtcaccgcgttcgaggacggcatcctc
gaacgcttcgccgcgaccatgaagggccagcgttcgcaggccaggcgcgagcagcttttg
cagcaggtggtggcgaccgcggcggtctga
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