Bradyrhizobium sp. BF49: BF49_0541
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Entry
BF49_0541 CDS
T04337
Name
(GenBank) ATPdependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
brad
Bradyrhizobium sp. BF49
Pathway
brad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BF49_0541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brad03019
]
BF49_0541
03400 DNA repair and recombination proteins [BR:
brad03400
]
BF49_0541
Enzymes [BR:
brad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BF49_0541
Messenger RNA biogenesis [BR:
brad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BF49_0541
DNA repair and recombination proteins [BR:
brad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BF49_0541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
HHH
Fic-like_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
CUT09461
LinkDB
All DBs
Position
I:574693..576558
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AA seq
621 aa
AA seq
DB search
MSSPSTAPLPAPAHGPDALSVLRSVFGLPGFRGAQGEIIRHVTDGGNCLVLMPTGGGKSL
CYQLPALLREGCGVVVSPLIALMRDQVAAMLEAGVNAAALNSSLTPQEASDIERRLIAGD
LDLLYVAPERLVTPRCLALLARAKVALFAIDEAHCVSQWGHDFRPEYVGLSIIAERFPDV
PRIALTATADELTRKEIVERLQLADSPHFVSSFDRPNIRYEIVDKRNAVSQLKDFIRERH
AGDAGVVYCLSRKRVEEVAAALDDAGIAALPYHAGLDSSVRSRNQDRFLNEDGIVIVATI
AFGMGIDKPDVRFVAHLDLPKSIEAYYQETGRAGRDGKPSAAWMAYGLSDIVQQRRMIDE
SSGSEEFKRVSIGKLDALVGLAETPHCRRQRLLAYFGEIVMGGGCGNCDNCLTPPKMRDG
KVLAQKLLSCVYRTGQRFGAMHLIDVLIGRLTEKVTQFGHDKLTVFGIGRELNEKQWRTV
LRQLVAMGHLLSDSEAFGALKLTDSSRGVLRGETEVWLREEAPGTRIRSSRAKSRRGDLA
PAAGAPQGDVDPELRARLRAWRSEIARERGVPAYVVLHDATIDGIVRAWPTTMDELRNVP
GIGDKKLEHYGDELLQIVRTR
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctccttccaccgctccgctgcctgcgccggcccacggccccgatgcgctgtcg
gtgctgcgttcggtgttcggcctgcccgggttccgcggcgcgcagggcgagatcatccgg
cacgtcaccgacggcggcaattgcctggtgttgatgccgaccggcggcggcaagtcgcta
tgttaccaattgccggcactgctgcgcgaaggctgcggtgtcgtggtgtctcccttgatt
gcgctgatgcgcgaccaggtcgccgccatgctcgaagccggcgtcaatgccgccgcgctg
aactcgtcgctgaccccgcaggaagcctccgacatcgagcggcgcctgatcgcgggtgat
ctcgacctgctctatgtcgcaccggaacgactggtgacgccgcgctgcctggcgctgctg
gcgcgggcgaaggtggcgctgttcgcgatcgacgaggcgcattgcgtctcgcaatggggc
catgattttcgtcccgaatatgtcggcctgtcgatcatcgccgagcgctttcccgacgtg
ccgcgcatcgcgctgaccgcgactgccgacgaattgacccgcaaggagatcgtcgagcgg
cttcagcttgcagacagtccgcacttcgtctccagcttcgatcgtcccaacatccgttac
gagatcgtcgacaagcgcaacgcggtatcgcagctcaaggatttcatccgggagcgtcac
gcgggcgatgcgggcgtcgtctattgcctgtcccgcaaacgggtcgaggaggtcgccgcc
gcgctcgacgacgccggcattgcggcgttgccctaccacgccgggctcgacagcagcgtg
cgctcgcgcaaccaggaccgcttcctcaacgaggacggcatcgtcatcgtcgcgaccatt
gccttcggcatgggcatcgacaagccggacgtgcgcttcgtcgcgcatctcgatctaccc
aagagtatcgaggcctattaccaggagacgggacgcgccggccgtgacggcaagccctcg
gcggcctggatggcctacggtctctcggacatcgtgcagcagcgccgcatgatcgacgag
tcgagcggctccgaggaattcaagagggtctctatcggcaagctcgatgcgctcgttggc
cttgccgaaacgccgcactgccggcgccagcggctgctcgcttatttcggcgagatcgtg
atgggcgggggctgcggcaattgcgacaattgcctgacgccgccgaaaatgcgcgacggc
aaggtgctggcgcaaaagcttctgtcctgcgtctaccgtaccgggcagcgcttcggcgcg
atgcacctcatcgacgtgctgatcggacggctcaccgagaaggtgacgcagttcggccac
gacaagctcacggtgttcggcatcggacgcgagctcaacgagaagcaatggcgtaccgtg
ctgcggcagctcgtggcgatgggacatttgctgagtgacagcgaagctttcggcgcgctg
aagctgacggattcctcgcgcggcgtgctgcggggcgaaacggaggtctggctgcgcgag
gaagcgcccggcacccggatccgttcgagccgcgccaagtcccgccgcggtgatctggcg
ccggcggccggtgcgccgcagggcgatgtcgatcctgaattgcgcgcgcggctacgagcc
tggcgctcggagattgcccgcgaacgcggcgtgccggcctacgtcgtgctgcacgacgcc
actatcgacggcatcgttcgcgcatggccgaccacgatggacgagctgcgcaacgtgccc
ggcatcggcgacaagaagctcgagcattacggcgacgagctgctgcagattgtcaggacg
cggtag
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